Gene Information

Name : SOD_c35950 (SOD_c35950)
Accession : YP_008139759.1
Strain : Serratia odorifera 4Rx13
Genome accession: NC_021591
Putative virulence/resistance : Unknown
Product : host specificity protein J
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4064425 - 4067808 bp
Length : 3384 bp
Strand : -
Note : -

DNA sequence :
ATGCACGTTATTGAAGGCCGTAAAGGTGGCAGCAGCAGCCCGAGCACGCCGACAGAATCACCCGACTCTTTGCAGTCCAC
CTCTTATGCAAAAATACTTCTGGCGCTTGGTGAAGGTGAGTTTGCTGGCGATCTTGATGGTACCCGTATTTTTCTTGATG
GTACTCCGCTGACCTCAGCCGATGGCACTGAAAACTTTCCCGGTGTGAAATGGGAGTTCCGCTCAGGTACGCCGCATCAA
GATTATATTCCTGGCATGCCGGATGTAGAAAATGAAATTACTGTAAACACCGAACTGACCAGTGATCGGGACTGGGTGCG
ATCGGTGACCAACACCCAACTTTCTGCTGTTCGTTTACGAGATTCGTGGGCGCAATTACAACAACAGCAGGATAACGGGG
ATGTCGTGGGTTATCGAATTGAATATGCGATCGATATTGCTACTGACGGTGGGGCATATCAAGAGGTCTTGCATACGGCT
GTTGATGGCAAAACGACGACAAAATATGAACGTAGCCACCGTGTCGATTTACCCCCGGCCTTAACCGGCTGGCAGGTTCG
TGCCCGTCGTTTGACACCGAACAGTACCAGCAATCGTATTGCCGATAAGATGGTTATCGAAGCCATTACGGAAACCATAG
ACGCCAAGCTGCGTTATCCAGAAACAGCCCTCTTGTTTATTCAATTTGATGCAAAACAGTTTCCCAATATTCCCCAGGTG
TCCTGTGAGCCAAAAGGGCGAATTATCCGTGTGCCTTCGAATTACAACCCAGAAACGCGGGTTTACACTGGCGTATGGGA
TGGAACGTTTAAAATGGCGTGGACGAACAACCCCGCTTGGATAACGTATGACCTGATGATCAATGACCGATTCTCCATCG
GAACACGGGTAAAGGCAGAAAACCTTGCGTTGACAAAATGGGACTTATACCAGATCGGGCAGTACTGCGATCAGTTAGTT
CCAGATGGACGTGGTGGGGATGGGATGGAGCCACGATTCCTTTGTGACGTTTATATCCAGTCACAAGAGGATGCCTGGAA
CGTATTACGCGACATAGCATCCATTTATCGCGGCTCTACTTTTTGGGCAAATAACGGCATGAATGTACTGGCGGATATGC
CCGCCGATGTTAAATACATATTCACCCGTGCCAGTGTTAAAGATGGCAAGTTTACATATTCAAGCGCCAGCGAGAAAACG
CATTATAGCACCTGCATGGTGAGCTGGAGCGACCCGGCAAACGGTTATCAGGATGCGATAGAGCCAGTTGCAGAGCAGTC
GCTGATTCGTCGCTATGGCATCAAGCAAGCTGACCTGACGGCGATCGGATGCATACGAAAGTCTGAAGGAATTCGTCGGG
GCAAATGGCTGCTACACACCAACGATAAAGATCGCCTGGTATCGTTCACCGTTGGCCTTGATGGCAAAGTACCTCTGCCG
GGTTGGGTTATTGCTATCGCGGATGAAATGCTAGCAGGTCGTCCACTCGGTGGCCGGGTATCATCAGTGGATGGCCGCAA
TGTCAATCTTGACCGGGTTTCCTCAGCAGCAGTTGGTGAGCGGTTAATTCTGAATCTTCCAAGCGGGAAGGCTGAGGGGC
GAACCATTGCGGCGGTATCGGGTAAAACCGTTACGGTCACGACGGCGTATTCTGAAACGCCGGTTGCCGAGGCTGTATGG
GCAGTTGACGCGTCAGACCTCGCCCTGCAACAGTTCCGCGTTACCGGCATTAAAGAAGGCGATGACGGGGTATCATTCGA
TATTACTGCTGTCGAGCATGACCCGAATAAATACCCAAAAATTGATACTGGCGCTCGAATCGAAGACCCACCGATCAGCG
TTATTCCACCTGGTGTGCAGCCGCCGCCGACAAACGTCCAAATTGGCGAATCCTCAGCGGTAATACAGGGACTTGCTGTT
GCGACACTGCGCGTCACGTGGAACAGAGCAGAAAGCGCTATTGCCTATGAGGCCGAGTGGCGTAGGGATAACGGTAACTG
GATACCAGCACCGCGCACTTCAACACTCGGGTTTGAGGTTTCCGGCATTTATGCTGGTCGCTATCAGGCTCGTGTGCGTG
CCATTAACCCATCTGAAATTTCCAGCGTATGGGCGAACGCGCCAGAAATGGTACTGACCGGTAAGCAGGGAGAGCCACCG
GCACTGGCCAGCTTCACGACGATCGGCCAGGTGTTCGGTATCGTGTTGAACTGGGAGTTTCCTCTCGGGGCCGAGGATAC
GCAGCGGACTGAAATCTGGTATAGCCAGAACTCAGATGGCAGTAACAAAATGCACCTAGGTGATTATGCCTACCCGCAGC
GTAGCCACACGATGACGGGGCTGGCTGCTGGTGTGAATTTCTGGTTCCAGGCGCGTCTGGTGGATAAGCTGGGAAATACA
GGGCCGTGGACGGGCTGGACGCAAGGAACATCAAGCGAAGACGCCAGCGAAGTGCTGGACTACCTGAAAGGGAAAATCAC
CGAGACGGAGCTGGGGCAGGAGCTGCTGGGGCCTGTCGAAGATGCCGGAAAACTGAAGGATATGTGGTCAGTGAAGGTTG
GCCAGACCGTTGACGGCAAACTGTATACCGCTGGGATCGGCGTGGGCGTTGAGAATACTCCCGAGGGGATGCAGTCACAG
GTTCTGATTCTGGCTGACCGTTTCGCCGTACTGAATACCGCTGATGGTCAGGGTTCTGAAGTATCTGTCCCGTTCGCGAT
TGAGAATAACCAAGTTTTCATTAACTCGGCATTTATTAAGGATGCATCAATAACCAATGCCAAAATTGGTGATTGGATTT
CATCCTCTAATTATGATTGGGTTACAGGGAAAACCGGGTGGTTGATTGACAAGACCGGCTGGGCATCATTTGCCAATTGC
GATATTCGTGGAACAATAACGGCAACTTCAGGTGAATTTAATAATGGGACATTTAGTAACTGTCACATTCTTGAAAATTG
CATTATTGATGGCAAGTTGTCTGCGGCAAATATTGAAGGGAATCTGGTTCAGGGAAACTCATTCTCATTCAATGTTTCAA
ATACCGGTGGTGGGCGAACGGTTCATTATGATGGAAACCCATTAATGCCAATGCGTATTTATGGCTACATAATGGCAGTA
ATGCGTAAAAATCAAAAAACAAAAATTTACTTTAATGGTAATGAGGGAAGTGCTGTTGATGGGTTAGATATTGCCAGAAA
TGGTGAATCCTCTACTGGGTATTCTTACACGAAGATGTTCAGTTTTTCTCGTGATGTAGGTAAAGGAGAAGCACTTGATA
TAAATGTAAGTGCTGGTTCCCTCGACCAGGGTAATGGTGAATCTACAAATTACACAGTAATGGTTTGGGCAACACCTCAG
AATAGCGGGTTCTCAGTAGTATAA

Protein sequence :
MHVIEGRKGGSSSPSTPTESPDSLQSTSYAKILLALGEGEFAGDLDGTRIFLDGTPLTSADGTENFPGVKWEFRSGTPHQ
DYIPGMPDVENEITVNTELTSDRDWVRSVTNTQLSAVRLRDSWAQLQQQQDNGDVVGYRIEYAIDIATDGGAYQEVLHTA
VDGKTTTKYERSHRVDLPPALTGWQVRARRLTPNSTSNRIADKMVIEAITETIDAKLRYPETALLFIQFDAKQFPNIPQV
SCEPKGRIIRVPSNYNPETRVYTGVWDGTFKMAWTNNPAWITYDLMINDRFSIGTRVKAENLALTKWDLYQIGQYCDQLV
PDGRGGDGMEPRFLCDVYIQSQEDAWNVLRDIASIYRGSTFWANNGMNVLADMPADVKYIFTRASVKDGKFTYSSASEKT
HYSTCMVSWSDPANGYQDAIEPVAEQSLIRRYGIKQADLTAIGCIRKSEGIRRGKWLLHTNDKDRLVSFTVGLDGKVPLP
GWVIAIADEMLAGRPLGGRVSSVDGRNVNLDRVSSAAVGERLILNLPSGKAEGRTIAAVSGKTVTVTTAYSETPVAEAVW
AVDASDLALQQFRVTGIKEGDDGVSFDITAVEHDPNKYPKIDTGARIEDPPISVIPPGVQPPPTNVQIGESSAVIQGLAV
ATLRVTWNRAESAIAYEAEWRRDNGNWIPAPRTSTLGFEVSGIYAGRYQARVRAINPSEISSVWANAPEMVLTGKQGEPP
ALASFTTIGQVFGIVLNWEFPLGAEDTQRTEIWYSQNSDGSNKMHLGDYAYPQRSHTMTGLAAGVNFWFQARLVDKLGNT
GPWTGWTQGTSSEDASEVLDYLKGKITETELGQELLGPVEDAGKLKDMWSVKVGQTVDGKLYTAGIGVGVENTPEGMQSQ
VLILADRFAVLNTADGQGSEVSVPFAIENNQVFINSAFIKDASITNAKIGDWISSSNYDWVTGKTGWLIDKTGWASFANC
DIRGTITATSGEFNNGTFSNCHILENCIIDGKLSAANIEGNLVQGNSFSFNVSNTGGGRTVHYDGNPLMPMRIYGYIMAV
MRKNQKTKIYFNGNEGSAVDGLDIARNGESSTGYSYTKMFSFSRDVGKGEALDINVSAGSLDQGNGESTNYTVMVWATPQ
NSGFSVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_01044 YP_001437149.1 hypothetical protein Not tested Not named Protein 0.0 59