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Name : clpB (SOD_c34390) Accession : YP_008139603.1 Strain : Serratia odorifera 4Rx13 Genome accession: NC_021591 Putative virulence/resistance : Virulence Product : chaperone protein ClpB Function : - COG functional category : - COG ID : - EC number : - Position : 3858018 - 3860792 bp Length : 2775 bp Strand : + Note : - DNA sequence : ATGCCTATTTTATGTGATATTTGTCATGCCCGCCCGGCATCGGGCCGTGTGACAGTAATGCAAAATGGTCAGAGGAAATC CATTGCCATCTGTGATTACGATTACCGGCAATTGACGCGCCACCAAAATATTCTCAATCCTTTCGACTCCTTGTTGGGTG GCGGCGGTGCCTTATCGCGTTTCTTCAATGAGTTAACGGAAGACGAAGCGGCGGAAGAAGCGTCCGGGTTTTCTGCGGAA GTCCCGCGCGAATCCGTCGATGCCACCGACGCCTTCAGCAAACAAACGCTTGAGCTGCTGCAACGCGCGGCAGAAAAAGC GCATGAACTGCACCGCAGTGAACTTGATACCGAGCACCTGCTGTATGTGTTGGCGGATACCGATGTCTGTTCCGCCCTGC TGACGGAACTCAAATTGTCGCCGCAGGACATCAAGGCCTACATTGACCAGCATGCTTACAAGGGGGCCGCCGAAACCGGC GCCACTCTGGAAGACATGACGGTCTCCCCACGGCTGAAAAAAGCCTTCATGTACGCTTTTCAGGTCTCCCGCGATTTGGG CCATTCCTACGTTGGCCCGGAGCATTTGCTGATCGGGCTCAGTGAAGTGCCGGACAGCATTGCCGGCGCCCTGTTGAAAA AATACGGCGTCACCCCAGCCGCTCTGCGACAGAAAGTGGTGAAGCTTGTGGGGAAAGGTGCGGAAGACGGCCGTATCGAC ACCCCGACGGGCACGCCAACGCTGGATAAGTTTGGCCGCGATCTGACTGAAATGGCGCGCCAGGGCAAGCTGGATCCGGT GCTCGGCCGCGCGCAGGAGATTGAAAGTACCATTGAGGTGCTTGCCCGCCGCAAGAAAAACAACCCGGTGCTGATCGGCG AACCTGGCGTGGGCAAAACCGCCATAGTGGAAGGGCTGGCGCAGCGCATTGTCAAAGGTGACGTGCCCGAAGTGCTGCGG GGAAAACGCCTGGTCGAAGTGAATATCAACTCCATGGTGGCGGGCGCAAAATACCGCGGCGAATTTGAAGAACGCGCCAA ACAGTTGATTGATGAGGTCAGCGAGAAAAATGCCGAACTGATTTTGTTTATCGACGAACTCCATACCATTGTCGGTGCCG GTCAGGGCGGCGGCGAAGGCGGCCTGGACATTGCCAACGTGCTGAAACCGGCGCTGGCGCGCGGTGAACTGAGCCTGATT GGCGCCACAACCCTCAATGAATACCAAAAGCATATCGAGAAAGATGCCGCGCTCGAACGCCGATTCCAGCCGGTTTTGGT ACCGGAACCGACCGTCGACCAGACCATCGTCATTCTGCGAGGCCTGCGCGACAAGCTGGAAGCGCACCATCAGGTGACCT TTGTTGATGAAGCGTTCGTCGCTGCGGCCGAACTGTCCGATCGCTATATCACGTCACGCTTCTTGCCGGACAAGGCCATC GATCTGATTGACCAGGCGGCGGCCCGCGTTCGCATTTCCGCCACCTCCCGGCCGGCTGATATTCAGGAGTTGGAAGCGGA AATCGCCCACCTGAAACGCGAGCAAGACTCGGCGTCTTCCCGTAAAAAGTTTGACGACGTTAAAAGCTTCGAGACGCAAA TTAGTGACAAACGTGCGCGTCTTGATGAGTTAACGGAAGCCTGGCAGCGCAAAACGGGGTCAGAGACGCTGGAAGTCACC CTGTCTTCCGTCGCTGAAGTGGTGTCGCGCCTGACCGGCATCCCGGTGACCGAGTTAACCCAGGAAGAGCGGAAAAAACT GCTCAATATGGAAGACAAGCTGCGTGAACGCGTGGTCGGGCAAGATGACGCGGTCGAGGCCGTCAGCGACGCCGTACGCC TGTCGCGCGCCGGGCTGAGCCAGGCACACCGCCCTATCGCCACCTTCTTGTTCCTCGGCCCTACCGGCGTCGGTAAAACC GAGCTGGCCAAGGCCATCGCCGAAACGGTATTCGGTGACGAACAGGCCATTATCCGTATCGACATGTCGGAATACATGGA GCGCCATGCCGTAGCCCGCCTGATCGGTGCCCCTCCGGGGTACGTGGGTTATGACGAGGGCGGCCAGTTGACCGAGCGTG TAAGACGCCGCCCTTACAGCGTAATTTTGCTCGACGAGATCGAGAAAGCGCACCCGGACGTCTACAACGTGCTGTTGCAG GTATTCGATGATGGCCGCCTGACGGACGGTAAAGGGCGCGTGGTCGATTTCAGCAACACCACCATCATTGCTACCAGCAA CCTCGGTTCTGCGGTGATCATGAATAACGCCTCGCTGCCGGAGGCGGAACGCAAGTCAGACAAGGCGATTCACGATGAAT TGATGCAAGTGCTCAAGGGACACTTCCGCCCTGAGTTCCTGAACCGCATCGATGAAGTCATCGTGTTCAACTCCCTGTCT CAGGAAAACATTCGTTTAATCGTGAATATCCAGCTTGAGCATTTAACGCGCACGGCGGCGGCTCAGAATATCACCCTCAA TATTGCCGATTCGCTGGTGGAACACCTGGTGGACGTGGGCTATCAGCCTGACTTCGGCGCCCGTGAATTGAAACGCAGGA TCCGCCAGGAAGTGGAAACCCGATTGGCGAAGGAAATTCTTGGCGACAACCTGAAGTCGGGCGACAGCGTCGAGATTGGC TATGATCAAACAACTGACAAGGTCGTGTTTAACAAACCTATCCCCACGAGCAAGGAGAATCCAGCCCCACCGGCAACACC AGAACCGCCTGTTACTCAGGCTGGGCCGCAAACGCCCGCGGAGCCGCAGGCATAA Protein sequence : MPILCDICHARPASGRVTVMQNGQRKSIAICDYDYRQLTRHQNILNPFDSLLGGGGALSRFFNELTEDEAAEEASGFSAE VPRESVDATDAFSKQTLELLQRAAEKAHELHRSELDTEHLLYVLADTDVCSALLTELKLSPQDIKAYIDQHAYKGAAETG ATLEDMTVSPRLKKAFMYAFQVSRDLGHSYVGPEHLLIGLSEVPDSIAGALLKKYGVTPAALRQKVVKLVGKGAEDGRID TPTGTPTLDKFGRDLTEMARQGKLDPVLGRAQEIESTIEVLARRKKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEVLR GKRLVEVNINSMVAGAKYRGEFEERAKQLIDEVSEKNAELILFIDELHTIVGAGQGGGEGGLDIANVLKPALARGELSLI GATTLNEYQKHIEKDAALERRFQPVLVPEPTVDQTIVILRGLRDKLEAHHQVTFVDEAFVAAAELSDRYITSRFLPDKAI DLIDQAAARVRISATSRPADIQELEAEIAHLKREQDSASSRKKFDDVKSFETQISDKRARLDELTEAWQRKTGSETLEVT LSSVAEVVSRLTGIPVTELTQEERKKLLNMEDKLRERVVGQDDAVEAVSDAVRLSRAGLSQAHRPIATFLFLGPTGVGKT ELAKAIAETVFGDEQAIIRIDMSEYMERHAVARLIGAPPGYVGYDEGGQLTERVRRRPYSVILLDEIEKAHPDVYNVLLQ VFDDGRLTDGKGRVVDFSNTTIIATSNLGSAVIMNNASLPEAERKSDKAIHDELMQVLKGHFRPEFLNRIDEVIVFNSLS QENIRLIVNIQLEHLTRTAAAQNITLNIADSLVEHLVDVGYQPDFGARELKRRIRQEVETRLAKEILGDNLKSGDSVEIG YDQTTDKVVFNKPIPTSKENPAPPATPEPPVTQAGPQTPAEPQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 4e-171 | 46 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 5e-104 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_008139603.1 | chaperone protein ClpB | VFG0079 | Protein | 0.0 | 52 |
