Gene Information

Name : cpxR1 (SOD_c33710)
Accession : YP_008139535.1
Strain : Serratia odorifera 4Rx13
Genome accession: NC_021591
Putative virulence/resistance : Resistance
Product : transcriptional regulatory protein CpxR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3783914 - 3784594 bp
Length : 681 bp
Strand : -
Note : -

DNA sequence :
ATGAAAATTTTATTGGTCGATGACGACCTGGAGCTCGGCACCATGCTGAGCGAATACCTGACCGGCGAAGGGTTTAACGC
CACGTTGGTGCTGACCGGCAAGGCCGGGGTGGAAGGCGCGTTGTCGGGCGAGTATACCGCGATGATCCTCGACATCATGC
TGCCGGACATGAGTGGTATTGATGTGCTGCGCGACGTGCGTAAAAAAAGCCGTATGCCGATCATCATGTTGACGGCCAAA
GGCGACAATATCGATCGGGTTATCGGCCTGGAGATGGGCGCCGATGACTACATGCCCAAGCCGTGCTATCCGCGTGAACT
GGTGGCTCGCCTGCGCGCAGTGTTGCGCCGTTTCGACGAGCGTCCGGAGGAGGTGGATGACGAGATAGCCATCAGCTTCG
GTGAATTGACGCTCAACCCTTCCACCCGCAGCAGCGAATGGCGCGGCAAGGCGTTTGATCTGACCGCTTCGGAGTTCAAC
CTGCTGGAACTGCTGTTGCGCGCGCCGGAGCGTGTGGTGTCCAAGGACGAGCTGTCGGAAAAAGGATTGGGGCGCCCGCG
TGAAGCCTATGACCGCAGCGTTGACGTTCATATCAGCAACATCCGCCAGAAACTGGGCGCGCTGACGGACAACATGCTCA
GCATTGAAACGGTGCGCAGCATCGGCTACCGCATCAGGTAA

Protein sequence :
MKILLVDDDLELGTMLSEYLTGEGFNATLVLTGKAGVEGALSGEYTAMILDIMLPDMSGIDVLRDVRKKSRMPIIMLTAK
GDNIDRVIGLEMGADDYMPKPCYPRELVARLRAVLRRFDERPEEVDDEIAISFGELTLNPSTRSSEWRGKAFDLTASEFN
LLELLLRAPERVVSKDELSEKGLGRPREAYDRSVDVHISNIRQKLGALTDNMLSIETVRSIGYRIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDB402_0209 YP_005126722.1 two-component system response regulator Not tested Not named Protein 1e-10 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cpxR1 YP_008139535.1 transcriptional regulatory protein CpxR CP000675.2.gene1535. Protein 4e-42 49
cpxR1 YP_008139535.1 transcriptional regulatory protein CpxR CP004022.1.gene3215. Protein 9e-34 43
cpxR1 YP_008139535.1 transcriptional regulatory protein CpxR CP001138.1.gene4273. Protein 5e-31 42
cpxR1 YP_008139535.1 transcriptional regulatory protein CpxR CP001485.1.gene721.p Protein 8e-31 42
cpxR1 YP_008139535.1 transcriptional regulatory protein CpxR CP000034.1.gene3834. Protein 6e-31 42
cpxR1 YP_008139535.1 transcriptional regulatory protein CpxR NC_002695.1.915041.p Protein 6e-31 42
cpxR1 YP_008139535.1 transcriptional regulatory protein CpxR CP001918.1.gene5135. Protein 6e-27 42
cpxR1 YP_008139535.1 transcriptional regulatory protein CpxR BAC0533 Protein 2e-31 41
cpxR1 YP_008139535.1 transcriptional regulatory protein CpxR CP000647.1.gene4257. Protein 2e-31 41
cpxR1 YP_008139535.1 transcriptional regulatory protein CpxR AE000516.2.gene3505. Protein 3e-26 41