Gene Information

Name : catB (SOD_c32610)
Accession : YP_008139432.1
Strain : Serratia odorifera 4Rx13
Genome accession: NC_021591
Putative virulence/resistance : Resistance
Product : chloramphenicol acetyltransferase CatB
Function : -
COG functional category : -
COG ID : -
EC number : 2.3.1.28
Position : 3665651 - 3666280 bp
Length : 630 bp
Strand : -
Note : -

DNA sequence : 
ATGTCTGAAAAACACTGGTCCAAAACAGAACTGCTGCACCAAACGGTGACCAATCCCAATATTATCGTCAAGGGAACCCA
CAGCTATTACAGCGACTGCTGGGATAGCGGTTTCGAACGCTCCGTCGTGCGTTATTTACACGGCGACGCGGTCAGCCAAC
AGTGGCCACCGTTGGGGCCGATAGACAAATTGCTGATCGGCGATTATGTCTGCATAGCCGCCGAGGCGGTGATCCTGATG
GGCGGCAATCATACGCACCGTATCGATTGGCTGAGCCTGTACCCGTTTATGGAGAGCATCCAGGCCGCTTATCAGCCCAA
GGGCGATACCCGGTTGGGCGACGGCTGCTGGATAGGCATGCGGGCGATGCTGATGCCGGGCGTCACTATTGGCGAAGGGG
CGGTGGTGGCTGCAGGCAGCATAGTGACTGCGGATGTCGAACCTTACGCCATCGTGGGCGGCAACCCGGCGCGGCCGATC
AAGCTGCGGTTTACTCCGGAGACGATCGCAGGGTTACTCGCGTTGCGCATTTATGATTTGTCGGCGGAGGATTTTGCCCG
TGTGCAACCTTGGCTGGCCGACAATGATATTGCCGCCCTGGAACGGGCGATAAACGACATTAAGCGTTAA

Protein sequence : 
MSEKHWSKTELLHQTVTNPNIIVKGTHSYYSDCWDSGFERSVVRYLHGDAVSQQWPPLGPIDKLLIGDYVCIAAEAVILM
GGNHTHRIDWLSLYPFMESIQAAYQPKGDTRLGDGCWIGMRAMLMPGVTIGEGAVVAAGSIVTADVEPYAIVGGNPARPI
KLRFTPETIAGLLALRIYDLSAEDFARVQPWLADNDIAALERAINDIKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB8 YP_005797132.1 chloramphenicol acetyltransferase Not tested AbaR4e Protein 3e-23 44
catB3 AET25385.1 chloramphenicol acetyltransferase Not tested PAGI-2(C) Protein 2e-23 41
catB3 AFG30108.1 chloramphenicol acetyltransferase Not tested PAGI-2 Protein 2e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
catB YP_008139432.1 chloramphenicol acetyltransferase CatB CP000675.2.gene50.p0 Protein 3e-55 60
catB YP_008139432.1 chloramphenicol acetyltransferase CatB NC_011595.7057349.p0 Protein 1e-49 52
catB YP_008139432.1 chloramphenicol acetyltransferase CatB NC_010410.6000796.p0 Protein 1e-49 52
catB YP_008139432.1 chloramphenicol acetyltransferase CatB NC_011586.7045146.p0 Protein 6e-50 52
catB YP_008139432.1 chloramphenicol acetyltransferase CatB AY123251.gene2.p01 Protein 9e-24 44
catB YP_008139432.1 chloramphenicol acetyltransferase CatB CP001581.1.gene990.p Protein 2e-34 42
catB YP_008139432.1 chloramphenicol acetyltransferase CatB AF322577.2.gene4.p01 Protein 1e-23 41
catB YP_008139432.1 chloramphenicol acetyltransferase CatB AY740681.1.gene5.p01 Protein 1e-23 41