Gene Information

Name : katA (SOD_c31940)
Accession : YP_008139365.1
Strain : Serratia odorifera 4Rx13
Genome accession: NC_021591
Putative virulence/resistance : Unknown
Product : catalase KatA
Function : -
COG functional category : -
COG ID : -
EC number : 1.11.1.6
Position : 3585103 - 3586539 bp
Length : 1437 bp
Strand : +
Note : -

DNA sequence :
ATGAGCAAGAAAGGATTGACCACCGCAGCCGGTGCCCCGGTTGTCGATAACAATAATGTGATCACCGCAGGAAAACGCGG
GCCGATGCTGCTGCAGGACGTCTGGTTCCTGGAAAAACTGGCCCATTTCGACCGCGAAGTGATCCCCGAGCGCCGCATGC
ACGCCAAAGGTTCCGGCGCCTACGGCACTTTCACCGTCACCCATGATATTACCCGATACACCCGCGCAAAAATCTTCGCT
GAAATCGGCAAGCAAACCGACATGTTCATCCGCTTCTCCACCGTAGCCGGTGAACGCGGCGCAGCAGACGCCGAGCGCGA
CATTCGCGGTTTTGCCATGAAATTTTACACCGATGAAGGCAACTGGGATCTGGTAGGCAACGACACGCCGGTTTTCTATC
TGCGCGATCCGCTGAAGTTTCCCGATCTTAACCACGTAGTAAAACGCGATCCGCACACCAACCTGCGCAACCCGGTGTAC
AAATGGGATTTCTTCTCCCATCTGCCGGAATCTTTGCACCAATTGACCATCGATTTCAGCGATCGCGGTATCCCGAAATC
CTATCGCCACATGCATGGTTTCGGCAGCCACACCTTCAGCTTTATCAATGCCAATAACGAGCGTTTCTGGGTGAAATTCC
ACTTCCGCTGCGAACAGGGCATTGAAAACCTGATGGATGACGAAGCGGAAGCAATCATCGCCAAAGATCGCGAAAGCTCG
CAGCGCGACCTGTTCGACGCAATCAAGCGCGGTGATTTCCCGCGATGGAAGCTGCAAATTCAAATCATGCCTGAACACGA
AGCCTCGCAGACGCCCTACAACCCGTTCGATCTGACCAAAGTATGGCCGCATGGCGACTACCCGCTGATCGACGTCGGCT
TCTTCGAACTGAACCGCAACCCGGACAACTATTTCTCAGAAGTCGAACAGGTGGCGATGAACCCGGCCAACGTGGTTCCG
GGCGTCAGCTTCTCGCCGGACAAAATGCTGCAAGGCCGCCTGTTCTCTTACGGGGATGCGCACCGTTACCGCCTGGGCGT
TAACCATCACCAAATCCCGGTTAACGGCGCCAAATGCCCGTTCCACAACTATCACCGCGACGGCGCGATGCGCGTGGACG
GCAACAGCGGCAACGGGGCGACCTACGAACCGAACAGCTTCGGCCTGTTCCAGGAGCAACCGGACTTCAGCGAACCGCCG
TTGAGCATCGAAGGTGCTGCCGATCACTGGAATCACCGCGAGGATAAGGATTATTTCAGCCAGCCACGCGCGCTGTTCAA
CCTGCTGAGTGCCGAAGAACACCAGCGTATGTTCACCCGTATCGCCGGTGAACTGTCGCAAGTGCCGGAACAGATCCAAC
GCCGTCAGGTCGATCTGTTTACCCAGGTGCACCCGGACTACGGCGCCGGCGTCGCCAGTGCGCTTGGCTTGAAGTAA

Protein sequence :
MSKKGLTTAAGAPVVDNNNVITAGKRGPMLLQDVWFLEKLAHFDREVIPERRMHAKGSGAYGTFTVTHDITRYTRAKIFA
EIGKQTDMFIRFSTVAGERGAADAERDIRGFAMKFYTDEGNWDLVGNDTPVFYLRDPLKFPDLNHVVKRDPHTNLRNPVY
KWDFFSHLPESLHQLTIDFSDRGIPKSYRHMHGFGSHTFSFINANNERFWVKFHFRCEQGIENLMDDEAEAIIAKDRESS
QRDLFDAIKRGDFPRWKLQIQIMPEHEASQTPYNPFDLTKVWPHGDYPLIDVGFFELNRNPDNYFSEVEQVAMNPANVVP
GVSFSPDKMLQGRLFSYGDAHRYRLGVNHHQIPVNGAKCPFHNYHRDGAMRVDGNSGNGATYEPNSFGLFQEQPDFSEPP
LSIEGAADHWNHREDKDYFSQPRALFNLLSAEEHQRMFTRIAGELSQVPEQIQRRQVDLFTQVHPDYGAGVASALGLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
katA ABD94664.1 catalase isozyme A Not tested ExoU island A Protein 0.0 79
katA YP_005126717.1 catalase Not tested Not named Protein 2e-96 51
katA YP_005680448.1 catalase Not tested PiCp 3 Protein 5e-93 42
katA YP_005682539.1 catalase Not tested PiCp 3 Protein 5e-93 42
katA YP_003782575.1 catalase Not tested PiCp 3 Protein 5e-93 42
katA YP_005684630.1 catalase Not tested PiCp 3 Protein 5e-93 42