Gene Information

Name : arsB (SOD_c28430)
Accession : YP_008139022.1
Strain : Serratia odorifera 4Rx13
Genome accession: NC_021591
Putative virulence/resistance : Resistance
Product : arsenical pump membrane protein ArsB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3184993 - 3186279 bp
Length : 1287 bp
Strand : -
Note : -

DNA sequence : 
ATGATGGTACTGGCTGGGACAATTTTTATTCTGACACTCATTTTGGTGATCTGGCAGCCAAAAGGGTTGGGCATTGGCTG
GAGCGCCTCGCTCGGGGCGGTGCTGGCGCTGCTGACAGGCGTGGTGCATCCCGCTGATATTCCGCTGGTTTGGCACATTG
TCTGGAACGCCACGGCGACCTTTATCGCGGTGATCGTCATCAGCCTGTTGCTGGATGAGTCCGGGTTCTTTGAGTGGGCG
GCGCTGCACGTTGCGCGCTGGGGCAAGGGCAAAGGGCGGTGGTTGTTCACCTATATTGTGTTGCTGGGGGCTAGCGTGGC
GGCGCTGTTCGCCAACGACGGCGCGGCACTGATCCTTACGCCGATTGTGATTGCGATGCTGCTGGCGCTGGGGTTCAGCT
CGGGCGCCACGCTGGCGTTCGTGATGGCGGCGGGATTTATTGCCGACACAGCCAGCCTGCCGCTGGTGGTCTCTAATCTG
GTGAACATCGTCTCGGCAGATTTTTTCAAGCTGGGCTTTACTCAGTATGCCGCCGTGATGGTGCCGGTGGACATTGCCGC
CATTGTCGCAACGTTGGTGATGCTGCACCTGTATTTTCGCAAGGATATTCCGGTGAGCTATGACCTGGCGCTGCTGCGGC
CGCCGCGCGAGGCGATCCGCGATTTGCCGACCTTTAAAGCCGGTTGGGGCGTGTTGGCCATGCTGCTGGTGGGTTTCTTT
GGCCTGGAGCCGCTTGGCGTACCGGTCAGCCTGGTCGCCGCCGTAGGGGCGTTGATCCTGCTGGCAGTGGCGAAAAGAGG
GCATGCGATTGACACCGGTAAAGTGTTGCGTGGTGCGCCCTGGCAGATCGTAGTGTTCTCGTTGGGCATGTACCTGGTGG
TCTACGGTTTGCGCAACGCGGGATTAACCGATCTGCTGTCCGGTATGCTGGATAGCCTGGCCGAGCGGGGGCTGTGGGTG
ACCACGATGGGGACCGGTTTTCTGACGGCGTTCTTGTCTTCGATCATGAATAACATGCCGACGGTGCTGGTGGGCGCGCT
GTCGATCGACGGCAGCAACGCGGACGGCGTGATCAAGCAGGCGATGATTTACGCCAACGTAATAGGCAGCGATCTGGGGC
CGAAAATTACCCCTATCGGCAGCCTGGCTACGCTGCTGTGGCTGCATGTGCTGTCGCAGAAAAATATCGTCATCACCTGG
GGATATTACTTCCGGGTGGGGATAGTGATGACACTTCCGGTGTTGTTTGTCGCGTTGGCCGCTCTGGCCCTGCGCCTGTC
GCTTTAG

Protein sequence : 
MMVLAGTIFILTLILVIWQPKGLGIGWSASLGAVLALLTGVVHPADIPLVWHIVWNATATFIAVIVISLLLDESGFFEWA
ALHVARWGKGKGRWLFTYIVLLGASVAALFANDGAALILTPIVIAMLLALGFSSGATLAFVMAAGFIADTASLPLVVSNL
VNIVSADFFKLGFTQYAAVMVPVDIAAIVATLVMLHLYFRKDIPVSYDLALLRPPREAIRDLPTFKAGWGVLAMLLVGFF
GLEPLGVPVSLVAAVGALILLAVAKRGHAIDTGKVLRGAPWQIVVFSLGMYLVVYGLRNAGLTDLLSGMLDSLAERGLWV
TTMGTGFLTAFLSSIMNNMPTVLVGALSIDGSNADGVIKQAMIYANVIGSDLGPKITPIGSLATLLWLHVLSQKNIVITW
GYYFRVGIVMTLPVLFVALAALALRLSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 4e-149 84
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 3e-101 58
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 1e-103 58
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 2e-98 57

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
arsB YP_008139022.1 arsenical pump membrane protein ArsB BAC0578 Protein 5e-152 85
arsB YP_008139022.1 arsenical pump membrane protein ArsB BAC0576 Protein 3e-151 84
arsB YP_008139022.1 arsenical pump membrane protein ArsB BAC0031 Protein 8e-144 82
arsB YP_008139022.1 arsenical pump membrane protein ArsB BAC0577 Protein 3e-145 81
arsB YP_008139022.1 arsenical pump membrane protein ArsB BAC0574 Protein 1e-101 58
arsB YP_008139022.1 arsenical pump membrane protein ArsB BAC0575 Protein 4e-102 58