Gene Information

Name : yjdC (SOD_c02730)
Accession : YP_008136495.1
Strain : Serratia odorifera 4Rx13
Genome accession: NC_021591
Putative virulence/resistance : Unknown
Product : HTH-type transcriptional regulator YjdC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 307618 - 308277 bp
Length : 660 bp
Strand : -
Note : -

DNA sequence :
ATGCGCCTGCGTTCAGCGCGCATTTGCAGAAAACAGTGCGGTAAACGACACTGTGGATCAGAACCGAATTTGGAGGGAGC
ACAAGTGCAACGCGAACACGTCCTTGATACGGCACTGGGGCTGTTGGAACAACAGGGCCTGGCGACCACCACATTGGAAA
TGCTGGCAAACAAACTCGACGTGCAGCCGGGCGACCTTAAACGCTTCTGGCCGGATCGAGAGGCGCTGCTGTACGACAGC
CTGCGCTACCACGGCCAGCAAATCGACACCTGGCGCCGCCAACTGCTGTTGGACGAAACCCTGAGCCCGCAGCAAAAGCT
GCTGGCGCGCTATGACGTTCTGGCGGAGTACGTCCGGCACGATCGTTATCCCGGCTGCCTGTTTATTGCCGCCTGCAGCT
TCTTCCCGGAGGTGGATCACCCGATACACCAATTGGCGGAGCAACAAAAGCTGACGTCGCTGGAGCTGACCCGCGACCTG
CTGCGCCAAATGGACGCCGACGACGCCGATATGGTGGCGCAGCAGATGGAGCTGATTCAGGAAGGCTGCCTGAGCAAACT
GCTGGTAAAACGCCAGCTCCAGGATGTATCCGTCGCCAAACGGCTGGCGGAAGATATCTTGCAGGTAGCACAGTGCCGCA
GAAACGGTGCTTTAGGCTGA

Protein sequence :
MRLRSARICRKQCGKRHCGSEPNLEGAQVQREHVLDTALGLLEQQGLATTTLEMLANKLDVQPGDLKRFWPDREALLYDS
LRYHGQQIDTWRRQLLLDETLSPQQKLLARYDVLAEYVRHDRYPGCLFIAACSFFPEVDHPIHQLAEQQKLTSLELTRDL
LRQMDADDADMVAQQMELIQEGCLSKLLVKRQLQDVSVAKRLAEDILQVAQCRRNGALG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0341 CAF28570.1 putative transcription regulator Not tested YAPI Protein 2e-61 78