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Name : topB (SOD_c25600) Accession : YP_008138739.1 Strain : Serratia odorifera 4Rx13 Genome accession: NC_021591 Putative virulence/resistance : Unknown Product : DNA topoisomerase 3 Function : - COG functional category : - COG ID : - EC number : 5.99.1.2 Position : 2873051 - 2874976 bp Length : 1926 bp Strand : - Note : - DNA sequence : ATGCGACTGTTTATTGCCGAGAAACCGAGTTTGGCGCGCGCCATTGCCGACGTTCTTCCCAAACCGCATCGTCGCGGTGA CGGGTTTATTGCCTGTGGCAACAATGATGTGGTCACCTGGTGTGTGGGCCATTTACTAGAGCAGGCGCAGCCGGATGCCT ACGATAGCCGCTATGCGCGCTGGTCGCTGGCGGATCTGCCCATTATCCCCGAAAAGTGGCAACTGCAGCCGCGTCCCTCG GTCAGTAAACAGCTTAATGCGATTAAAAAGCTATTACATGATGCTGACGAGGTAGTGCATGCCGGTGACCCGGATCGCGA AGGACAATTACTGGTGGATGAGGTGCTGGACTATCTGGCGTTGACGCCGGAAAAACGTCACAGCGTGCGCCGTTGCCTGA TTAACGATCTCAACCCGCAGGCGGTGGAGCGCGCTATAGAACGACTGCGTGACAACCGCGACTTTATCCCGCTGTGCGTC TCCGCGCTGGCGCGTTCCCGCGCTGACTGGCTGTATGGCATCAACATGACCCGAGCCTATACCATCTTAGGGCGAAATGC CGGCTATGACGGCGTGTTGTCCGTTGGGCGGGTGCAGACGCCGGTGTTGGGGTTAGTGGTGCGGCGTGATGAAGAGATTG AAAACTTTGTGCCAAAAGACTTCTTTGAAGTCAAAGCGCACATCGTGACGCCAAAGGAAGAGCGCTTTGTCGCGCTTTGG CAACCGAGTGACTCTTGCGAGCCTTATCAGGACGAAGAAGGGCGTCTGCTGCACCGGCCGCTGGCGGAGCACGTGCTTAA ACGCATCGAGGGCCAGCCTGCGCTGGTCACGTCCTATAATGATAAACGGGAATCAGATACCGCTCCGCTGCCGTTTTCGC TCTCGACGCTGCAGATTGAGGCTTCCAAACGTTTCAACCTGAGTGCGCAGCAGGTGCTGGATGTCTGCCAGCGGTTGTAT GAAACGCATAAATTGATCACCTATCCGCGTTCCGACTGCCGCTATCTGCCGGAAGAACATTTTGCCGGGCGTCATGCGGT GCTTAACGCGATCAGCGCTCATCAACCGGATCTTTACCCGCAGCCGGTGATCGACAGCGATCGTCGCAACCGTTGCTGGG ACGATAAAAAAGTTGATGCCCACCATGCCATTATTCCTACTGCCCGCGCCAGCAAAGTGAGCCTCAGTCAGGACGAATTG AACGTCTATGGGTTGGTGGCGCGCCAGTACCTGATGCAGTTTTGCCCGGATGCCATGTTCCGCAAATGCGTGATTGAGCT GGATATCGCCGGGGGGAAATTTGTTGCCAAAGCGCGTTTCCTGGCCGAAGCGGGCTGGCGGACGCTGCTGGGCAGCAAAG AACGCGACGAAGAAAACGAAGGTTCTCCGTTGCCGGTGGTGGCGAAAGATGATGAGCTATTGTGCGAACGTGGTGAGGTG GTGGAACGCCAGACTCAGCCTCCGCGGCCTTTCACCGATGCCAGTCTGCTTTCTGCCATGACTGGCATAGCGCGTTTCGT ACAAGATAAAGCGCTAAAGAAAATCCTGCGAGCGACCGATGGTTTAGGTACCGAGGCGACGCGTGCGGGCATCATTGAGT TGCTGTTCAAGCGGGCGTTTTTGTACAAGAAAGGGCGTTATATTCATTCCAGCGAGACCGGTCGGGCGTTGATCCATTCG CTGCCGGATATTGCGGCTCGCCCTGATATGACGGCCAACTGGGAGGCTACGCTGACGCAAATCAGTGAAAAATCCTGCCG CTATCAGGACTTTATGCAACCCTTGGTAGGCACTTTGCAGGAGCTGATTTATCAGGCCAAGCAAAGCCGGGCGAGTATGG CGTTTCGCGGGTTGCCGCCGTCGCCTTCCGCCGGGGCAAAAAAACGCAAGAAAAGCGCCGGCAAGGCGCGGGAGAAAAGC GAGTGA Protein sequence : MRLFIAEKPSLARAIADVLPKPHRRGDGFIACGNNDVVTWCVGHLLEQAQPDAYDSRYARWSLADLPIIPEKWQLQPRPS VSKQLNAIKKLLHDADEVVHAGDPDREGQLLVDEVLDYLALTPEKRHSVRRCLINDLNPQAVERAIERLRDNRDFIPLCV SALARSRADWLYGINMTRAYTILGRNAGYDGVLSVGRVQTPVLGLVVRRDEEIENFVPKDFFEVKAHIVTPKEERFVALW QPSDSCEPYQDEEGRLLHRPLAEHVLKRIEGQPALVTSYNDKRESDTAPLPFSLSTLQIEASKRFNLSAQQVLDVCQRLY ETHKLITYPRSDCRYLPEEHFAGRHAVLNAISAHQPDLYPQPVIDSDRRNRCWDDKKVDAHHAIIPTARASKVSLSQDEL NVYGLVARQYLMQFCPDAMFRKCVIELDIAGGKFVAKARFLAEAGWRTLLGSKERDEENEGSPLPVVAKDDELLCERGEV VERQTQPPRPFTDASLLSAMTGIARFVQDKALKKILRATDGLGTEATRAGIIELLFKRAFLYKKGRYIHSSETGRALIHS LPDIAARPDMTANWEATLTQISEKSCRYQDFMQPLVGTLQELIYQAKQSRASMAFRGLPPSPSAGAKKRKKSAGKAREKS E |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 1e-111 | 41 |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 1e-103 | 41 |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 4e-101 | 41 |
