Gene Information

Name : tpx (SOD_c24710)
Accession : YP_008138651.1
Strain : Serratia odorifera 4Rx13
Genome accession: NC_021591
Putative virulence/resistance : Virulence
Product : putative thiol peroxidase Tpx
Function : -
COG functional category : -
COG ID : -
EC number : 1.11.1.-
Position : 2774987 - 2775490 bp
Length : 504 bp
Strand : +
Note : -

DNA sequence :
ATGACTCAGACAGTACATTTCCAAGGCAACCCGGTCAGCGTTGCAGGCCATCTGCCACAGTCAGGCGAACAAGCCAAAGC
GTTCTCGCTGGTTGCCAAAGACCTGTCAGACGTAGCGCTAAGCAGCTTCGCGGGTAAACGCAAAGTCCTGAACATTTTCC
CAAGTATTGATACCGGCGTTTGCGCTGCCTCGGTACGTAAATTCAACCAACTGGCCAGCGGTCTGGATAATACCGTGGTG
CTGTGCATCTCCTCCGATTTGCCGTTCGCCCAGTCACGCTTCTGCGGCGCGGAAGGTCTGAGCAACGTAGTGACGCTGTC
TACCCTGCGTGGTTCAGAATTCAAACAGGCTTACGGCGTCGAAATCGCAGAAGGCCCGTTGGCGGGTCTGACTGCGCGTG
CGGTCGTGGTGCTGGATGGCCAGGACAATGTGCTGTACAGCGAGCTGGTGAATGAGATCACCAACGAGCCGGATTACGAT
GCTGCGCTGGCTGCACTGAAGTGA

Protein sequence :
MTQTVHFQGNPVSVAGHLPQSGEQAKAFSLVAKDLSDVALSSFAGKRKVLNIFPSIDTGVCAASVRKFNQLASGLDNTVV
LCISSDLPFAQSRFCGAEGLSNVVTLSTLRGSEFKQAYGVEIAEGPLAGLTARAVVVLDGQDNVLYSELVNEITNEPDYD
AALAALK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 2e-34 49
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 8e-35 49
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 1e-34 49
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 5e-35 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tpx YP_008138651.1 putative thiol peroxidase Tpx VFG0087 Protein 2e-35 49