Gene Information

Name : iucD2 (SOD_c23600)
Accession : YP_008138540.1
Strain : Serratia odorifera 4Rx13
Genome accession: NC_021591
Putative virulence/resistance : Virulence
Product : L-lysine N6-monooxygenase IucD
Function : -
COG functional category : -
COG ID : -
EC number : 1.14.13.59
Position : 2645201 - 2646526 bp
Length : 1326 bp
Strand : -
Note : -

DNA sequence :
ATGAACCAGCGTTTGGACTTTATCGGCATTGGTATCGGCCCGTCCAACCTCAGTCTTGCTGCGCTTGGAAGCGAAATCGA
AGGTTTCAATTGCAAATTCCTCGAACGCAAACCGCACTTTTCCTGGCACCCCGGCATGATCCTGGCAGATAGCAATATGC
AGACCCATTTTTTGAAGGATCTGGTCACCGCCGTTTCGCCAACCAACCCTTATAGTTTTCTCAACTATCTGGTGAAGAGT
AAAAAGTTCTACCGCTTCCTGACGACTGAACAGCGTACTGCGTCGCGCGAAGAGTTTGCCGATTATCTCAACTGGGCGGC
AACGGGGTTGGATTCGCTGATGTTCAATCAAGAGGTTCGCCGCGTGGACTTTGATGACGAACAGCGGCAGTTTGTCGTCA
CCACCCAGAATGACGTGCTTTACGCTAAACACCTGTGTGTGGGCATAGGCAAGCAAATCAAACTGCCGAACTGCGTGACC
GAACAAAACGATCAATGCTTTCACGCCAGCGAAATGATGTTGCGCCAGCCAAACCTTGCCGGAAAACGCGTGGTCATTGT
GGGCGGCGGTCAAAGCGGTGCCGACCTGTTCTTGAATATTTTCCAAGGGGAATGGGGCCGACCAGAACACCTTGGCTGGA
TATCTCGACGCAACAACTACAACGCACTTGATGAAGCCGCCTTTGCCAACGAGTATTTTACGCCGGATTATGTCGACAAC
TTCTACACGCTCGGCCACACAGCCAAAGAACACATGCTGCAAGAACAAAAGATGACTTCCGATGGGATCACCAGCGAGTC
TCTGTTGGCAATTTACCGCGCCATGTATCACCACTTCGACGTACTCCGCGAGAAACGATGGGTGAGCCTGCTGCCCAGCC
GTTCAGTTACGGCCCTTAATGCCAAAGATAATGCTTATCGGTTAGAGACGCTTCATCACCTTGATCAAGGGCGAGAAAGC
TTTGATGCAGACGTGGTCATTTTTGCGACCGGCTATGAACAGGCCCGCCCGGCATTTCTTGACTCCCTGGCTGATCGTTT
GTTGACCACCCCCGATGGGCAATACCGTATCGCTTCTGATTTTACCCTTGAGCGGGAAGGGGAACATGAGAATTGCTTGT
TTGCCGTTAACGCCAGCATGCATCACCACGGCATTGCCGATCCGCAGCTTAGCCTGGTGGCCTGGCGATCGGCACGCATT
CTCAATCGAGCTTTAGGCCACAACCAATTTGATTTGAGCACCACTCCGGCGATGATTCAATGGCGCAGTGAGCAAGAACA
ACCCGTCGCTTTAAATCCCTTGATGGCCGCTTGGTCACCCCTTTAA

Protein sequence :
MNQRLDFIGIGIGPSNLSLAALGSEIEGFNCKFLERKPHFSWHPGMILADSNMQTHFLKDLVTAVSPTNPYSFLNYLVKS
KKFYRFLTTEQRTASREEFADYLNWAATGLDSLMFNQEVRRVDFDDEQRQFVVTTQNDVLYAKHLCVGIGKQIKLPNCVT
EQNDQCFHASEMMLRQPNLAGKRVVIVGGGQSGADLFLNIFQGEWGRPEHLGWISRRNNYNALDEAAFANEYFTPDYVDN
FYTLGHTAKEHMLQEQKMTSDGITSESLLAIYRAMYHHFDVLREKRWVSLLPSRSVTALNAKDNAYRLETLHHLDQGRES
FDADVVIFATGYEQARPAFLDSLADRLLTTPDGQYRIASDFTLEREGEHENCLFAVNASMHHHGIADPQLSLVAWRSARI
LNRALGHNQFDLSTTPAMIQWRSEQEQPVALNPLMAAWSPL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucD AAD44749.1 IucD Virulence SHI-2 Protein 3e-129 60
iucD NP_839220.1 lysine:N6-hydroxylase Virulence SHI-2 Protein 4e-129 60
iucD NP_709457.1 lysine:N6-hydroxylase Virulence SHI-2 Protein 4e-129 60
iucD YP_002414043.1 L-lysine 6-monooxygenase Virulence Not named Protein 5e-129 59
iucD AAK71634.1 IucD Virulence SHI-3 Protein 5e-129 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
iucD2 YP_008138540.1 L-lysine N6-monooxygenase IucD VFG0618 Protein 2e-129 60
iucD2 YP_008138540.1 L-lysine N6-monooxygenase IucD VFG0937 Protein 2e-129 59
iucD2 YP_008138540.1 L-lysine N6-monooxygenase IucD VFG1084 Protein 3e-129 59