Gene Information

Name : aldA (SOD_c22410)
Accession : YP_008138421.1
Strain : Serratia odorifera 4Rx13
Genome accession: NC_021591
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase AldA
Function : -
COG functional category : -
COG ID : -
EC number : 1.2.1.3
Position : 2444403 - 2445923 bp
Length : 1521 bp
Strand : -
Note : -

DNA sequence :
ATGAAATATGTCCATCCCGGTTTGCCTGGCTCGCTGGTTTCTTTCAAACAACGCTACGGCAACTACATTGGCGGCAAATT
TGTCGAACCCGTTTCCGGTAACTACTTTACCGACACCTCCCCGGTAACCGGGAAAACTGTCGCCGAGTTCCCCCGCTCCG
ACGCCCAGGATATTGAGCGGGCGCTGGATGCGGCGCACGCCGCCGCTGAGTCCTGGGGAAACACCAGTGCACAAAATCGC
GCAAACGTGATGCTGGCCATCGCAGATCGCATGGAATCGCAATTGGAAATGCTGGCGCTGACCGAAAGCTGGGACAACGG
CAAGCCGATCCGCGAAACGCTGAATGCGGACATCCCGCTGGCGATCGATCATTTCCGTTACTTCGCCGGCTGCCTGCGCG
CGCAGGAAGGCACCGCCGCAGAGATTGATCAAAACACCGTGGCCTACCATATTTACGAGCCGCTGGGCGTAGTTGGACAG
ATTATCCCCTGGAACTTCCCGCTGCTGATGGCGGCCTGGAAACTGGCCCCGGCGCTGACTGCCGGTAACTGCGTGGTGCT
CAAGCCGGCAGAACAGACGCCGCTCAGCATTTGCGTGCTGCTGGAACTGATTGGCGATCTGCTGCCTCCGGGCGTTCTCA
ATGTGGTTCACGGCTTTGGCAAAGAGGCCGGCGAGGCGCTGGCGACCAGCAAGCGCATCGATAAAATCGCCTTTACCGGC
TCAACCCCGGTGGGCAGGCATATCCTGGCTTGCGCGGCGGAGAATATCATTCCCAGCACCGTAGAGCTGGGCGGTAAATC
ACCCAATATCTTCTTTGAAGACATCATGCAGGCCGAGCCGGAATTTATCGACAAGGCGGTTGAGGGACTGATCCTCGGCT
TCTTCAATCAGGGTGAAGTCTGTACCTGCCCTTCACGCGCGTTGATCCAAGAGTCAATCTACCCGCAATTTATGGAAAAA
GTGCTGGCGCGCATCACCGCCATTCGTCAGGGCGACCCGTTTGACACCGACACCATGATCGGCGCGCAGGCGTCCCAACA
GCAGTTCGACAAGATCCTCTCTTACATCGAAATCGCCAAAAACGAAGGCGGGAAAATCATCGCCGGCGGCGAGCGTACCC
ACCAGGAACAGACGTTGCAGCAAGGTTTTTATCTCCAGCCAACGCTCATCACCGGTAATAACAGCATGCGCTTCTTCCGT
GAAGAGATCTTTGGGCCGGTCATCGGCATCGCCACCTTCAAAGACGAAGCCGAAGCGCTGGCGCTGGCCAACGACACCGA
GTTCGGGCTGGGCGCAGGCCTGTGGACCCGTGACAGCAACCGCGCCTATCGCATGGGCCGCGCGCTCAAGGCCGGACGCG
TCTGGACCAACTGCTATCACCTCTACCCGGCGCACGCTGCCTTCGGGGGATATAAAAACTCCGGTGTCGGCCGTGAAACG
CACAAAGTGGCGCTGTCGCATTACCAGCAGGTGAAAAACCTGTTGGTGAGCTATGACGCCAAACCGCAAGGGCTGTTTTA
A

Protein sequence :
MKYVHPGLPGSLVSFKQRYGNYIGGKFVEPVSGNYFTDTSPVTGKTVAEFPRSDAQDIERALDAAHAAAESWGNTSAQNR
ANVMLAIADRMESQLEMLALTESWDNGKPIRETLNADIPLAIDHFRYFAGCLRAQEGTAAEIDQNTVAYHIYEPLGVVGQ
IIPWNFPLLMAAWKLAPALTAGNCVVLKPAEQTPLSICVLLELIGDLLPPGVLNVVHGFGKEAGEALATSKRIDKIAFTG
STPVGRHILACAAENIIPSTVELGGKSPNIFFEDIMQAEPEFIDKAVEGLILGFFNQGEVCTCPSRALIQESIYPQFMEK
VLARITAIRQGDPFDTDTMIGAQASQQQFDKILSYIEIAKNEGGKIIAGGERTHQEQTLQQGFYLQPTLITGNNSMRFFR
EEIFGPVIGIATFKDEAEALALANDTEFGLGAGLWTRDSNRAYRMGRALKAGRVWTNCYHLYPAHAAFGGYKNSGVGRET
HKVALSHYQQVKNLLVSYDAKPQGLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 9e-158 66
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 1e-163 65
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 1e-163 65
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 1e-163 65
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 8e-163 65
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 7e-66 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
aldA YP_008138421.1 aldehyde dehydrogenase AldA VFG0082 Protein 4e-158 66