Gene Information

Name : pykF (SOD_c20010)
Accession : YP_008138184.1
Strain : Serratia odorifera 4Rx13
Genome accession: NC_021591
Putative virulence/resistance : Virulence
Product : pyruvate kinase I
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.1.40
Position : 2178433 - 2179845 bp
Length : 1413 bp
Strand : -
Note : -

DNA sequence :
ATGAAAAAGACCAAAATTGTTTGTACCATCGGTCCAAAAACCGAATCGGAAGAAATGCTGACCAACCTGCTCAATGCAGG
CATGAACGTAATGCGTCTCAACTTCTCCCACGGCGATTACGAAGAACACGGCAACCGCATCAAGAACATGCGCGCAGTAA
TCGCGAAAACCGGTAAAAACGCCGGCATCCTGCTGGATACCAAAGGCCCGGAAATCCGCACCATGAAGCTGGAAGGCGGT
AAAGACGCGGCGCTGGTTGCCGGTCAGACCTTCACTTTCACTACCGACCAGAGCGTTATCGGCAATAACGAACGCGTTGC
CGTTACCTACGCCGGCTTCTCCGCCGATCTGAAAATCGGCAATACCGTGCTGGTCGACGATGGCCTGATCGGCATGGAAG
TCACTAACGTGACCGAGAACGAAGTGATCTGTAAGGTACTGAACAGCGGCGATCTGGGCGAAAACAAAGGCGTTAACCTG
CCGGGCGTTTCCATCCAACTGCCTGCATTGGCAGAAAAAGACAAACGCGACCTGATTTTCGGCTGTGAACAAGGTGTCGA
CTTCGTTGCCGCGTCCTTTATCCGCAAACGCTCCGACGTGCTGGAAATCCGCGAACATCTGAAAGCCCACGGCGGCGAGC
AGATTCAGATCATCTCCAAAATTGAAAACCAGGAAGGCCTGAACAATTTCGACGAGATCCTCGAAGCCTCTGACGGCATC
ATGGTAGCTCGTGGCGATCTGGGCGTAGAAATCCCGGTAGAAGAAGTGATCTTCGCTCAGAAGATGATGATCGAAAAATG
TAATCGCGCACGTAAAGTGGTGATCACCGCCACCCAAATGCTGGATTCGATGATCAAGAACCCGCGCCCTACCCGTGCAG
AAGCCGGCGACGTGGCAAACGCCATTCTGGACGGCACCGACGCCGTTATGTTGTCAGGCGAGAGCGCCAAGGGCAAATAC
CCGCTGGAAGCCGTGACCATTATGGCCACCATCTGCGAGCGCACCGATCGCGTGATGCCAAGCCGTATTGACAGCCTGAA
CGACAACCGCAAACTGCGCATCACCGAAGCCGTCTGCCGTGGCGCCGTTGAAACCGCAGAAAAACTGGACGCGCCATTGA
TTGTGGTTGCCACCAGCGGCGGTAAATCAGCCAAATCCGTGCGTAAATACTTCCCTAACGCCGTGATCCTGGCGCTGACC
ACCAACGAAGTCACCGCTCGCCAATTGATCCTGACCAAAGGCGTTACGCCGCAAATGGTCAAAGAAATCGCCTCTACCGA
CGACTTCTATCGCATTGGCAAAGAAGCTGCACTGGCCAGTGGCCTGGCGCAAAAAGGCGACGTTGTGGTGATGGTTTCTG
GTGCTTTGGTACCAAGCGGCACCACCAATACTGCCTCGGTTCACGTGCTGTAA

Protein sequence :
MKKTKIVCTIGPKTESEEMLTNLLNAGMNVMRLNFSHGDYEEHGNRIKNMRAVIAKTGKNAGILLDTKGPEIRTMKLEGG
KDAALVAGQTFTFTTDQSVIGNNERVAVTYAGFSADLKIGNTVLVDDGLIGMEVTNVTENEVICKVLNSGDLGENKGVNL
PGVSIQLPALAEKDKRDLIFGCEQGVDFVAASFIRKRSDVLEIREHLKAHGGEQIQIISKIENQEGLNNFDEILEASDGI
MVARGDLGVEIPVEEVIFAQKMMIEKCNRARKVVITATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKY
PLEAVTIMATICERTDRVMPSRIDSLNDNRKLRITEAVCRGAVETAEKLDAPLIVVATSGGKSAKSVRKYFPNAVILALT
TNEVTARQLILTKGVTPQMVKEIASTDDFYRIGKEAALASGLAQKGDVVVMVSGALVPSGTTNTASVHVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 0.0 88
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 0.0 88
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 0.0 88
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 0.0 88

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pykF YP_008138184.1 pyruvate kinase I VFG0479 Protein 0.0 88