Gene Information

Name : yfeA (SOD_c19470)
Accession : YP_008138130.1
Strain : Serratia odorifera 4Rx13
Genome accession: NC_021591
Putative virulence/resistance : Virulence
Product : periplasmic chelated iron-binding protein YfeA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2118465 - 2119409 bp
Length : 945 bp
Strand : -
Note : -

DNA sequence : 
ATGCTTTTGAAACAACGCGCTTTTCCCCGCCTGCCACTCATTCAGGTTACGGCGTTTTACCGCCCTTTTGCTCTGCTGTG
TCTGCTGCTCGTCGCGGGCCTCGCCGGCAATCCCGCTTTAGCGGAAAAGAAACTGCGCGTGGTGACGACCTTCACCATCA
TTCAGGACATCGCTCAAAACGTGGCCGGCGACGCCGCGGTGGTTGAATCTATTACCAAGCCGGGAGCGGAGATCCACGAT
TATCAACCAACGCCACGCGATATCGTTAAAGCGCAGCACGCCGATTTGATCCTGTGGAACGGCATGAACCTCGAACGTTG
GTTCCAACGCTTCTTCGAAAACATCAAACAGGTTCCCGCCGCCGTGGTGACCGAAGGCATCACCCCGCTGCCAATCCGCG
AAGGGCCATATAACGGCAACCCGAATCCGCATGCCTGGATGTCTGCCAGCAATGCGCTTATCTATATAGAAAATATCCGT
AAAGCCCTGGTGCAGCACGACCCGGCCAACGCAGAAACCTATAACCGCAACGCCAAAGCCTATGCCGCCAAAATCAGCGC
GCTGGATGCCCCGCTGCGCGAGCGCCTGTCGCGTATTCCCGCAGCCCAACGTTGGTTGGTTACCAGCGAAGGCGCATTCA
GCTATCTGGCGAAAGACTATCAGTTGAAAGAAGTCTATCTGTGGCCAATTAACGCCGACGAGCAAGGTTCGCCGCAGCAA
GTTCGCCGGGTCATCGACGCCGTTCGCGCCAACCGCATTCCTGTGGTCTTCAGCGAAAGCACCATCTCCGACAAGCCGGC
CAGGCAGGTAGCGAAAGAAACCGGGGCGAAGTACGGCGGCGTGCTGTATGTCGATTCGTTGTCCACCCAGGGCGGCCCGG
TACCGACGTATATAGACCTGCTGAACGTCACCGTACAAACCATCGCCAAAGGATTTGATCAATGA

Protein sequence : 
MLLKQRAFPRLPLIQVTAFYRPFALLCLLLVAGLAGNPALAEKKLRVVTTFTIIQDIAQNVAGDAAVVESITKPGAEIHD
YQPTPRDIVKAQHADLILWNGMNLERWFQRFFENIKQVPAAVVTEGITPLPIREGPYNGNPNPHAWMSASNALIYIENIR
KALVQHDPANAETYNRNAKAYAAKISALDAPLRERLSRIPAAQRWLVTSEGAFSYLAKDYQLKEVYLWPINADEQGSPQQ
VRRVIDAVRANRIPVVFSESTISDKPARQVAKETGAKYGGVLYVDSLSTQGGPVPTYIDLLNVTVQTIAKGFDQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-91 66
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 2e-91 66
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 2e-91 66
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 2e-91 66
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 1e-91 66

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeA YP_008138130.1 periplasmic chelated iron-binding protein YfeA BAC0439 Protein 2e-112 84
yfeA YP_008138130.1 periplasmic chelated iron-binding protein YfeA BAC0349 Protein 7e-92 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeA YP_008138130.1 periplasmic chelated iron-binding protein YfeA VFG0525 Protein 7e-92 66