Gene Information

Name : yfeB (SOD_c19460)
Accession : YP_008138129.1
Strain : Serratia odorifera 4Rx13
Genome accession: NC_021591
Putative virulence/resistance : Virulence
Product : chelated iron transport system membrane protein YfeB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2117579 - 2118352 bp
Length : 774 bp
Strand : -
Note : -

DNA sequence : 
TTGCGCGTTGGTCGGCGTCAACGGCAGCGGCAAGTCGACGCTGTTCAAAAGCATCATGGGGCTGGTCAAACCCACCACCG
GCCGTGTGCAGTTGAACGACAAACCGGTGGCGCAAGCGCTGAAAAAAATATTATTGCCTACGTCCCGCAAACCGAAGACG
TCGACTGGAACTTCCCGGTGCTGGTAGAAGACGTTGTGATGATGGGCCGCTACGGCAAGATGAATTTTCTGCGCATTCCC
TCCCGGGAAGACCGACTGCGCGTCGACAAAGCGCTGGAGCGCGTTGGCCTGAGCGAACTGCGTACTCGCCAGATCGGCGA
GCTTTCCGGCGGGCAGAAAAAACGGGTGTTCCTCGCGCGGGCGCTGGCGCAACAAGGTTCCGTGCTGCTGTTGGATGAGC
CCTTCACCGGCGTGGACGTCAAAACCGAGAACGCAATTATCGATCTGCTGCGCGCGTTGCGTGACGAGGGTCACCTGATC
CTGGTTTCCACCCATAACCTGGGCAGCGTGCCGGAATTCTGCGACCGGGTGATCCTGATTAACCGCACTGTGCTGGCCGC
CGGCCCAACCGAAACCACCTTTACCCAAAGCAATCTGGAACAGGCGTTCGGCGGCGTGTTGCGCCATATCAACCTGTCCG
GCCCGGATCTGCACGACGATAACGATCCGCGCACCGTGACGGTATTGACCGATGACGAACGCCCGGCGGTGTTCTACGGC
CATACCAAGAGCGACCCTCCGGCGCAAAGCCAGCCAAAGGAGAAGCAACTCTGA

Protein sequence : 
MRVGRRQRQRQVDAVQKHHGAGQTHHRPCAVERQTGGASAEKNIIAYVPQTEDVDWNFPVLVEDVVMMGRYGKMNFLRIP
SREDRLRVDKALERVGLSELRTRQIGELSGGQKKRVFLARALAQQGSVLLLDEPFTGVDVKTENAIIDLLRALRDEGHLI
LVSTHNLGSVPEFCDRVILINRTVLAAGPTETTFTQSNLEQAFGGVLRHINLSGPDLHDDNDPRTVTVLTDDERPAVFYG
HTKSDPPAQSQPKEKQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 2e-61 67
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 2e-61 67
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 6e-62 67
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 3e-62 67
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 2e-62 67

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeB YP_008138129.1 chelated iron transport system membrane protein YfeB BAC0440 Protein 3e-91 87
yfeB YP_008138129.1 chelated iron transport system membrane protein YfeB BAC0350 Protein 1e-62 67
yfeB YP_008138129.1 chelated iron transport system membrane protein YfeB BAC0400 Protein 3e-37 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeB YP_008138129.1 chelated iron transport system membrane protein YfeB VFG0526 Protein 1e-62 67