|
Name : yfeD (SOD_c19440) Accession : YP_008138127.1 Strain : Serratia odorifera 4Rx13 Genome accession: NC_021591 Putative virulence/resistance : Virulence Product : chelated iron transport system membrane protein YfeD Function : - COG functional category : - COG ID : - EC number : - Position : 2115851 - 2116711 bp Length : 861 bp Strand : - Note : - DNA sequence : ATGGAAACCCTGTATCAACTGCTCAGTGAACCCTTCGCCTACCCGTTTATGCAGCGGGCGATCCTGGCCGCTATCGTGAC CGGCGTGGTGTGTGCGGTGCTGTCGTGCTATCTGGTGCTCAAAGGCTGGTCGCTGATGGGCGATGCTATCTCGCACGCTG TTCTGCCCGGCATTGTCGTGGCGTTCGTACTTGGCATCCCGGTGGTTATCGGCGCGTTTTTCTCCGGCATTTTCTGTGCG GTAGCCACCGGCTACCTGAAAGAGAACAGCCGGGTGAAAGAGGATACGGTGATGGGCATCGTTTTCTCCGGCATGTTCGC CTTCGGGCTGGTGCTGTTTTCCCGCGTCGATACCGATCAGCATCTGAGCCACATCCTGTTCGGCAATATGCTGGGGATTA CCGACGCCGAGCTGAAACAAACGCTGCTGATTGCCGGCATTACGCTGGTGGTGGTATTGCTCAAGCGCAAAGATCTGATG CTCTACTGTTTCGACCCGAACCATGCGAGGGTCATAGGTCTGCCGGTAAAACTGCTGCATTATGGGCTGCTGTGCCTGCT GGCGCTGACGATTGTCGCTTCTCTGCAGGCAGTCGGGGTGATACTGGTGATTGCGATGCTGATAGCCCCGGGCATCATTG CCTTTATGCTGTGCCGCAGTTTCGATCGCATGCTGGTCATCGCGACGCTGGTGTCGGTATTCTCCTGCGTGCTCGGTACC CTGATCAGCTTTCACATCGACGGCGCGACCGGCCCCTGTATTGTGATCGTTCAGGCGATTGCGTTTATTATCGCCCTGCT CTACAGCAAACTCAGGCCGTTACAACGTCACGAAGAGGCGTTGCGCAACGAGAAACCTTAA Protein sequence : METLYQLLSEPFAYPFMQRAILAAIVTGVVCAVLSCYLVLKGWSLMGDAISHAVLPGIVVAFVLGIPVVIGAFFSGIFCA VATGYLKENSRVKEDTVMGIVFSGMFAFGLVLFSRVDTDQHLSHILFGNMLGITDAELKQTLLIAGITLVVVLLKRKDLM LYCFDPNHARVIGLPVKLLHYGLLCLLALTIVASLQAVGVILVIAMLIAPGIIAFMLCRSFDRMLVIATLVSVFSCVLGT LISFHIDGATGPCIVIVQAIAFIIALLYSKLRPLQRHEEALRNEKP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sitD | YP_217784.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 2e-59 | 53 |
| sitD | AAD41068.1 | SitD | Virulence | centisome 63 pathogenicity island | Protein | 2e-59 | 53 |
| sitD | NP_457258.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 3e-59 | 53 |
| sitD | NP_806467.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 3e-59 | 53 |
| sitD | NP_461785.1 | permease | Virulence | SPI-1 | Protein | 2e-59 | 53 |
| sitC | AAD41067.1 | SitC | Virulence | centisome 63 pathogenicity island | Protein | 4e-45 | 41 |
| sitC | YP_217783.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 5e-45 | 41 |
| sitC | NP_461784.1 | permease | Virulence | SPI-1 | Protein | 5e-45 | 41 |
| sitC | NP_457257.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 4e-45 | 41 |
| sitC | NP_806466.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 4e-45 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| yfeD | YP_008138127.1 | chelated iron transport system membrane protein YfeD | BAC0442 | Protein | 1e-99 | 85 |
| yfeD | YP_008138127.1 | chelated iron transport system membrane protein YfeD | BAC0352 | Protein | 1e-59 | 53 |
| yfeD | YP_008138127.1 | chelated iron transport system membrane protein YfeD | BAC0441 | Protein | 3e-42 | 44 |
| yfeD | YP_008138127.1 | chelated iron transport system membrane protein YfeD | BAC0351 | Protein | 2e-45 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| yfeD | YP_008138127.1 | chelated iron transport system membrane protein YfeD | VFG0528 | Protein | 1e-59 | 53 |
| yfeD | YP_008138127.1 | chelated iron transport system membrane protein YfeD | VFG0527 | Protein | 2e-45 | 41 |
