Gene Information

Name : lolD (SOD_c18340)
Accession : YP_008138017.1
Strain : Serratia odorifera 4Rx13
Genome accession: NC_021591
Putative virulence/resistance : Resistance
Product : lipoprotein-releasing system ATP-binding protein LolD
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.-
Position : 1997709 - 1998413 bp
Length : 705 bp
Strand : +
Note : -

DNA sequence : 
ATGAGTAACCATCTTTTGCTGCAGTGCGAAAACCTGTGCAAGACCTATCAGGAAGGCAATCTGCATACCGACGTACTGCG
TAATGTCAGCTTTGCCATGCAGCCGGGTGAGATGATGGCGATTGTCGGCAGCTCGGGTTCCGGTAAAAGCACCCTGTTGC
ACCTGCTGGGTGGCCTGGATTCGCCAACCTCCGGCGAAGTGATCTACAAAGGCCAGTCGCTGAATACCCTGTCGTCGGCG
GCCAAGGCTGAGCTGCGCAACCGTCAGTTGGGCTTTATCTATCAGTTCCATCACCTGTTGCCGGACTTCACCGCGTTGGA
AAACGCCGCCATGCCGCTGTTGATCGGCGGCATGAAACCGGCCCAGGCGCAGGACAAGGCGCTGGAAATGCTGACGGCGG
TCGGGCTGGAAAAACGCAGCAAACACCGGCCTTCGGAGCTGTCCGGCGGCGAGCGTCAACGCGTGGCGATCGCCCGTGCG
TTGGTGAATAACCCGTCGCTGGTACTGGCGGACGAACCGACCGGTAATCTCGACAAGCGCACCGCCGACAGCATCTTTGA
TCTGCTCGGTGAGCTGAACGTGCGTCAGGGCACCGCCTTCCTGGTGGTGACCCATGACTTGCAACTGGCCAAGCGCCTCA
GCCGCCAGTTGGAAATGGCCGACGGCCACCTGCAGGCTCAACTGACCCTGATGGGAGCCGAGTAA

Protein sequence : 
MSNHLLLQCENLCKTYQEGNLHTDVLRNVSFAMQPGEMMAIVGSSGSGKSTLLHLLGGLDSPTSGEVIYKGQSLNTLSSA
AKAELRNRQLGFIYQFHHLLPDFTALENAAMPLLIGGMKPAQAQDKALEMLTAVGLEKRSKHRPSELSGGERQRVAIARA
LVNNPSLVLADEPTGNLDKRTADSIFDLLGELNVRQGTAFLVVTHDLQLAKRLSRQLEMADGHLQAQLTLMGAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-28 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_008138017.1 lipoprotein-releasing system ATP-binding protein LolD NC_008702.1.4606598. Protein 5e-40 47
lolD YP_008138017.1 lipoprotein-releasing system ATP-binding protein LolD NC_012469.1.7686878. Protein 5e-40 45
lolD YP_008138017.1 lipoprotein-releasing system ATP-binding protein LolD CP001581.1.gene798.p Protein 2e-36 41