Gene Information

Name : rob3 (SOD_c14020)
Accession : YP_008137593.1
Strain : Serratia odorifera 4Rx13
Genome accession: NC_021591
Putative virulence/resistance : Resistance
Product : right origin-binding protein Rob
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1522825 - 1523283 bp
Length : 459 bp
Strand : -
Note : -

DNA sequence : 
ATGGATCGCGTCAATATCATTCACGATTTGCTGAACTGGATTGAAACTCATCTGGATCAACCGCTGCTGTTAGATAACGT
GGCGGCGAAATCGGGCTACTCCAAGTGGCACCTGCAAAGGATGTTCCGCAGTACCACCGGCCATGCGCTGGGCAGCTATA
TCCGCGAGCGCCGCCTGTCACAGGCCGCGCAGGCGCTGCGTTCGACCCCACGCCCTATTCTCGACATCGCCCTGCAGTTC
CATTTTGATTCCCAACCGTCATTTTCACGCGCATTTAAAAAACAGTTCGGCAAAACGCCGGCAGTATATCGCCGCACCAC
GCGCTGGGATGTGGTAGAGATGCATCCGCAACCGATCACGCCGCAGAACGGGCATCGGCACGAGCCGTCGGGTGCGCACT
TGTGGTATGCGGGGAAATGCGTCGAAGGCGCCTGCACTCATTGGATGGGCCTACGCTGA

Protein sequence : 
MDRVNIIHDLLNWIETHLDQPLLLDNVAAKSGYSKWHLQRMFRSTTGHALGSYIRERRLSQAAQALRSTPRPILDIALQF
HFDSQPSFSRAFKKQFGKTPAVYRRTTRWDVVEMHPQPITPQNGHRHEPSGAHLWYAGKCVEGACTHWMGLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tetD AAL08447.1 putative transcriptional regulator TetD Not tested SRL Protein 1e-29 54
tetD AEA34665.1 tetracycline resistance protein D Not tested Not named Protein 1e-29 54

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
rob3 YP_008137593.1 right origin-binding protein Rob NC_010558.1.6276025. Protein 6e-30 54
rob3 YP_008137593.1 right origin-binding protein Rob CP001138.1.gene1637. Protein 2e-25 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
rob3 YP_008137593.1 right origin-binding protein Rob VFG1038 Protein 6e-30 54