Gene Information

Name : ybgA (SOD_c11210)
Accession : YP_008137317.1
Strain : Serratia odorifera 4Rx13
Genome accession: NC_021591
Putative virulence/resistance : Virulence
Product : YbgA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1239530 - 1240486 bp
Length : 957 bp
Strand : +
Note : -

DNA sequence : 
ATGAGTGACAAAATTCCGGTCGGGATCAGCGCCTGCCTGTTGGGCGACGCGGTGCGTTTTGATGGCGGCCATAAACGCCT
GGCCTTTGCGGTGGAGCAACTGGCGCCCTATGTGCGTTTTGAATCGGTGTGCCCGGAAATGGCGATCGGTTTGCCCACCC
CACGCCCGGCACTGCGGTTGAGCAAACAACAACATCCGTCGCCGGCGATGCGCTTCAGCAACGACGACAGCGTCGACGTG
ACCGACAAAATGCAGCGATTCTCCGAGCAACGCGTCGCGGAACTGGGGCATCTGTGCGGCTATATCGTTTGCGCCAAATC
GCCGAGCTGCGGTATGGAGCGAGTGCGGGTTTACAGCGAAAACGGAAAAGAGTCGCGCAAAAACGGCGTCGGGCTATTCA
CGGCCGAACTGCTGCGCCAGATGCCCTGGCTGCCGGTAGAAGAAGACGGGCGGCTGAATGATGCCACCCTGCGGGAAAAC
TTTGTCGAGCGGGTTTACGCGCTGTATGAACTGAATATGTTGTGGCGCAAGGGGTTGACCCGTGGCGGGCTGATCGCTTT
CCACAGCCGTTATAAGCTTTCGCTGCTGGCGCATTCGCAGCCGGAATACCGCGAACTGGGCCGTTTTGTCGCCGGTATCG
AAAAGTGGGCGTCGCTGGAGGCATTCGCCATTGAATACCGCAGCCGCCTGATGAGGCTGTTGGCGCACAAGGCTACGCGC
CGCAATCACACCAATGTGCTGATGCACGTGCAGGGGTATTTCCGCCGCCAGCTCAGTTCGGCTCAGCGGCAGGAGTTGGC
GCAACTGATCGATCGTTATCGCCAGGGAATGCAGCCGCTGTTGGCGCCGATCACCCTGCTCAAACATTACATGGCCGAAT
ACCCGGATCGCTATCTGGCCGATCAACGTTATTTCGAACCCTATCCCGAAGCGTTGCGTTTGCGTTACGGCCACTAA

Protein sequence : 
MSDKIPVGISACLLGDAVRFDGGHKRLAFAVEQLAPYVRFESVCPEMAIGLPTPRPALRLSKQQHPSPAMRFSNDDSVDV
TDKMQRFSEQRVAELGHLCGYIVCAKSPSCGMERVRVYSENGKESRKNGVGLFTAELLRQMPWLPVEEDGRLNDATLREN
FVERVYALYELNMLWRKGLTRGGLIAFHSRYKLSLLAHSQPEYRELGRFVAGIEKWASLEAFAIEYRSRLMRLLAHKATR
RNHTNVLMHVQGYFRRQLSSAQRQELAQLIDRYRQGMQPLLAPITLLKHYMAEYPDRYLADQRYFEPYPEALRLRYGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 1e-95 59
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 1e-95 59
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 1e-95 59
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 1e-95 59
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 1e-95 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ybgA YP_008137317.1 YbgA VFG0490 Protein 6e-96 59