Gene Information

Name : M062_04975 (M062_04975)
Accession : YP_008131444.1
Strain : Pseudomonas aeruginosa RP73
Genome accession: NC_021577
Putative virulence/resistance : Unknown
Product : type III effector Hop protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1061006 - 1061344 bp
Length : 339 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
GTGAACACTCCACATCCATCCCTTCGCCGAAGCTGCCTGGCCGTCTTGGCCTGCAGTGCGCTGGTCGCACAGGGAGCTTT
CGCAGCGAGCGCCTCCGAGCAGGCGAACCTGGAGGTGATGATCCGGCAGCTCAACGCCCTCGAGGACACCGCCCGCCGCA
GTGCCCAGGGCGCCGATGAGCCCGGACAGCGCTTCTACTTCGACTACTCACGCCTGGCCGCTGACCTGCAGCGCATCCGC
CAAGGCCTGCAGGACTACATGACGCCCAGCCGCGCCCAACCGCGTGACCCTTCCGACCTATCTGGGAATTACACCCTGCG
CGGAGGGCCGATGCCGTGA

Protein sequence :
MNTPHPSLRRSCLAVLACSALVAQGAFAASASEQANLEVMIRQLNALEDTARRSAQGADEPGQRFYFDYSRLAADLQRIR
QGLQDYMTPSRAQPRDPSDLSGNYTLRGGPMP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EXA41 ABD94650.1 conserved hypothetical protein Not tested ExoU island A Protein 2e-39 99
RL030 AAP84157.1 candidate type III effector Hop protein Not tested PAPI-1 Protein 7e-39 99
unnamed ABR13370.1 hypothetical protein Not tested PAGI-5 Protein 2e-38 98
pph76 CAI36117.1 candidate type III effector Hop protein Not tested PPHGI-1 Protein 7e-23 65