Gene Information

Name : M062_04950 (M062_04950)
Accession : YP_008131439.1
Strain : Pseudomonas aeruginosa RP73
Genome accession: NC_021577
Putative virulence/resistance : Unknown
Product : integrating conjugative element protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1058462 - 1059346 bp
Length : 885 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGATCCGGAAGTCGACAGCCACGCTCTTGCTGATGCTTGCCCTTCCCGCACTGGCCCAAGCGGTGGAGATTCTGCGCTG
GGAGCGCATTCCGCTGGCCATTCCGTTGACGGTCGGCCAGGAACGCATTGTATTCGTCGACAGGAACGTGCGAGTTGGCG
TTCCTCGGGACCTACAGGGCAAGTTGCGCGTCCAGAGTACCGGCGGTGCACTCTACCTGCTCGCCAACGAGCCGATTCCT
CCGGCGCGCCTGCGCCTGCAGGACGCGACCAATGGCGAGCAGATGCTCATCGATATCGCCGCCACCGAAGCCGCAGCCGA
TCAACAACCGCGCGAGCCGGTCAGGATCGTCGCCGGCGAGCCCGTGGCTCCGCACTATGGCCAGCCCCGGGAAGCCCAGC
CATCGGCAGCAGCGAAACAGACCGAGCAGGCAGAAGCACCGAAGGCCGTGCCGCGCGAAACGCCCGTCCCCGTGGTTCTG
ACGCGCTATGCGGCGCAGATGCTCTATGCCCCGCTTCGCACGGTGGAACCGGTAGATGGCGTCGGTCAGGTGCGCGTCAA
GCGACAGCTCGACCTGACCACCCTGCTCCCCAGCCTACCCATCACGGCTACCGCCATGGGCGCCTGGCGGCTGGACGACT
ACTACGTCACGGCGGTGAAGCTGCAGAATGCCAGCGCCCAGCACCTGGCCCTGGATCCCAGGGACCTGATGGGCAATTTC
GTCGCCGCAACCTTCCAGCACCCGTACTTGGGACCCCGGGGCGACGCTTCCGACACCACCACCGTGTATCTGGTGACGCG
CGGCCGCGGCCTTGCCGACGCGCTCCTGCCCTCCTCCATCAGCCAGATCGATCCCAAAGGAGGCCGTCGTGGCGCTGACC
GGTAA

Protein sequence :
MIRKSTATLLLMLALPALAQAVEILRWERIPLAIPLTVGQERIVFVDRNVRVGVPRDLQGKLRVQSTGGALYLLANEPIP
PARLRLQDATNGEQMLIDIAATEAAADQQPREPVRIVAGEPVAPHYGQPREAQPSAAAKQTEQAEAPKAVPRETPVPVVL
TRYAAQMLYAPLRTVEPVDGVGQVRVKRQLDLTTLLPSLPITATAMGAWRLDDYYVTAVKLQNASAQHLALDPRDLMGNF
VAATFQHPYLGPRGDASDTTTVYLVTRGRGLADALLPSSISQIDPKGGRRGADR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EXA36 ABD94645.1 conserved hypothetical protein Not tested ExoU island A Protein 1e-125 98
unnamed ABR13365.1 hypothetical protein Not tested PAGI-5 Protein 3e-126 98
RL025 AAP84152.1 conserved hypothetical protein Not tested PAPI-1 Protein 1e-125 97
pph81 CAI36122.1 hypothetical protein Not tested PPHGI-1 Protein 1e-85 63
ORF SG60 AAN62282.1 hypothetical protein Not tested PAGI-3(SG) Protein 3e-58 58
ORF C50 AAN62144.1 hypothetical protein Not tested PAGI-2(C) Protein 2e-71 58
YpsIP31758_3708 YP_001402662.1 hypothetical protein Not tested YAPI Protein 6e-55 50
YE3485 YP_001007644.1 hypothetical protein Not tested YAPI Protein 2e-55 50
PMI2580 YP_002152299.1 hypothetical protein Not tested Not named Protein 7e-54 50
STY4569 NP_458654.1 hypothetical protein Not tested SPI-7 Protein 1e-52 50
t4266 NP_807864.1 hypothetical protein Not tested SPI-7 Protein 1e-52 50
Pmu_03100 YP_005176209.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 5e-53 48
api36 CAF28510.1 hypothetical protein Not tested YAPI Protein 3e-55 47