Gene Information

Name : M062_04890 (M062_04890)
Accession : YP_008131427.1
Strain : Pseudomonas aeruginosa RP73
Genome accession: NC_021577
Putative virulence/resistance : Unknown
Product : integrating conjugative element protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1047907 - 1048845 bp
Length : 939 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGACCAGCCACAACCTCCGCCGCCTGGCAGCGGCGGCCGCCACCTTCAGCCTCTCGTTCACGGCCTCGGCCGCGATCAA
CAGCGCCGCCATCGTCTCCTCCACCCTTTCGCCCCAGTGCCTCGAATACAAGGTCGTCGGGATCTGCTACTGGCTGCTCT
GCGGCCCACATGGCTGCAAGGTGAAGACGTCGGTCAAGGTCCGCCACTACGTGCCTGACGCAGTCGTCTCCAGCTATGCG
AATACCGGGAGCAACCCCTGGACCGAGGTGTCGGCGCTGGGCACACCGAATCCACTCGCCCAGGCCGGCAATGACGCGAC
CACCAACTACAAGACCGAGAACAGCATCGGCCGCTTCAAGGAAGCGGATGTGATCGGCCATCCTGGCGGAGCCACGTTCA
GCCGGTTCGCCAGCGCCTCTGGGTACGTTTGTCCTGGCGCTACCTTCCCGCTGGTGCCCTACTTCCTCAGCACACTGGAC
GCCATTGGCTGGCGGCATGGAATTCCCGAGCAGGTGTACCCCGAGGCGTTGGTCCCAGGGCTGCGCGAGGTGGGGGGAAT
CTTCTCCGGCGACATGTGGGGGAACCTCTATCCGCGCAGCGGATTCCTGCACCAGACCGACGACTACAAGACGGCAGCCG
TCATCGCCCAGCGCGCCGGCGATATCACCACGCGAATCGGCCAACTCCACGTCTACCTCCCCATGCGCGCAGCCCCCAAG
GACGGCTACTGGCCGGCGGGCGAGCTGAAAGAGGGCGATGCCTCTACCGGGAAATGGCAGGAGCTGACCCCGTCCCTGAG
CCTCAACTGCGCGGTGTTTCCCAACTCAGGACCGAAGACGCAAGCCGTCGACGGCGATTACGCCTGGGCGCTCTGGCGTC
CCTACTCCTGCTGCCAGCGCAAGGGGCAGATCTTCCTCGGCAGTACCGACTTCCAATAA

Protein sequence :
MTSHNLRRLAAAAATFSLSFTASAAINSAAIVSSTLSPQCLEYKVVGICYWLLCGPHGCKVKTSVKVRHYVPDAVVSSYA
NTGSNPWTEVSALGTPNPLAQAGNDATTNYKTENSIGRFKEADVIGHPGGATFSRFASASGYVCPGATFPLVPYFLSTLD
AIGWRHGIPEQVYPEALVPGLREVGGIFSGDMWGNLYPRSGFLHQTDDYKTAAVIAQRAGDITTRIGQLHVYLPMRAAPK
DGYWPAGELKEGDASTGKWQELTPSLSLNCAVFPNSGPKTQAVDGDYAWALWRPYSCCQRKGQIFLGSTDFQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EXA20 ABD94629.1 conserved hypothetical protein Not tested ExoU island A Protein 1e-128 99
unnamed ABR13357.1 hypothetical protein Not tested PAGI-5 Protein 2e-128 99
RL017 AAP84144.1 conserved hypothetical protein Not tested PAPI-1 Protein 2e-125 98
pph89 CAI36130.1 hypothetical protein Not tested PPHGI-1 Protein 3e-101 73
ORF C43 AAN62136.1 hypothetical protein Not tested PAGI-2(C) Protein 9e-94 68
ORF SG51 AAN62273.1 hypothetical protein Not tested PAGI-3(SG) Protein 2e-93 67
Pmu_02990 YP_005176198.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 3e-64 51
STY4576 NP_458661.1 hypothetical protein Not tested SPI-7 Protein 1e-75 50
t4273 NP_807871.1 hypothetical protein Not tested SPI-7 Protein 1e-75 50
YpsIP31758_3701 YP_001402655.1 hypothetical protein Not tested YAPI Protein 2e-67 50
api54 CAF28528.1 conserved hypothetical protein Not tested YAPI Protein 2e-66 49
YE3467 YP_001007628.1 hypothetical protein Not tested YAPI Protein 1e-63 49
unnamed AAX39458.1 unknown Not tested Hrp PAI Protein 1e-55 48
PMI2573 YP_002152292.1 hypothetical protein Not tested Not named Protein 4e-64 48