Gene Information

Name : M062_04810 (M062_04810)
Accession : YP_008131411.1
Strain : Pseudomonas aeruginosa RP73
Genome accession: NC_021577
Putative virulence/resistance : Unknown
Product : integrating conjugative element relaxase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1025227 - 1027146 bp
Length : 1920 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGTTTCAACTCCTTTCCTGGATATCCAGGAAGCCGTCCCCCACCCCACCAACCAAAGCTGCCCCAGGGGTATTCCTCCT
TCCTCTAAGCAGTACGGAACTGCTCGACACGCCTCGCCGCCGCCAGCTACTGGAGAACATCTGGCAGCGCGCCTCGCTAT
CCAAGCAGCAATTCGAGGAGATCTACCGGCGGCCACTGGCCAACTATGCCGAGCTGGTCCAGCAGCTCCCGGCTTCAGAA
AACCATCACCATGCCCATCCAGGCGGGATGATTGATCACGGCCTGGAGATCGTGGCCTACGCACTGAAGGTACGGCAGAC
CTACCTGCTCCCGATCGGCGCAGCGCCGGAGTCACAGTCAGCCCAGACTGAAGCCTGGTCGGCCGCCGCAGCGTATGGCG
CCCTGGCTCACGACCTAGGCAAGATCGTCGTAGACCTGCAGGTGGAGCTGCAGGACGGCAGTACCTGGCACCCTTGGAAC
GGACCGATCAACCAGCCCTACCGCTTCAAGTACGTGAAGTCCCGCGAATACCAGCTCCACGGCGCTGCCTCAGCACTCCT
CATCCACCAACTGCTACCGCGCACTGCACTCGACTGGCTCAGTCGTTTTCCAGAGCTGTGGGCTCAATTGATCTACTTGT
TCGCAGGGCAGTACGAGCACGCCGGGATCCTGGGCGAGATCATCGTGAAAGCAGACCAGGCCTCCGTCGCGCAGGAGTTG
GGAGGTAATCCGGATCGAGCGCTGGCTGCACCGAAGCAGTCGCTGCAGCGGCAGTTGGCAGACGGGCTACGCTTCCTGGT
GAAGGACAAATTCAAGCTGAATCAGCCGGGCGGCCCGTCCGACGGGTGGCTGACTCAGGACGCACTCTGGCTGGTGAGCA
AGCCCGCGGCCGATCAGTTGAGGGCCTACCTGCTGGCTCAGGGAATCGAAGGGGTCCCCTCCTCCAACGCGTCATTCTTC
AACATGCTCCAGGACCAGGCCGTCATCCAGACGAACGCCGAGGACAAGGCCATCTGGACGGCCACGATAGACAATGGTGC
TGGGTGGAGAAACAAGTTCACGCTCCTCAAGATCGCTCCAGCCTTGATTTGGGCTGACCCTGCCGAGCGGCCTGATTCCT
ACAGCGGATCACTCGTCATTGAAGAGGGCAACGCCTCCTCTGAAAAGCCGGAAACGACCTGCGAAATCCCCAACGATTCG
ATTGAACAGCGACAGGCGCCAGAAGCCAAGATGACGCTCCGCCAACCTACGCCGAGCGTTGCGAAACCGTCAAACGAGAT
GCGGGCGATTGCGAAGCCCTCAGCTGAGGATCAGGAAGAAACAGATGATTTGTACGCGCTTCTTGGTAATATCAATTCGC
CACCAGAAGAGCTAGACACTAGCCACGACTCACCGGCTGCTTCTTCTACGAACACTCGCGGGGAGGAGAACCTACAGCAG
CCACTAGGGACCAAGGAGCCAACAGATTGCGCTCCTGAAGCAGTTGAAGATGTATTTATGCCTAGCAGAAGCACTGATCT
GGGACAGGGATTCGTTGGCTGGATGAAATCTGGCATCGCGGCCCGTCGCCTGTTCATCAACGACACCAAGGCTTTGGTGC
ATACCGTCGACGGGACCGCCATGCTGGTCACGCCAGGAATCTTCAAGCGCTATGTCCAAGAGCATCCGGAGCTTGAAAAA
CTGGCCCAGGCCAAGGAAACGACCGGCTGGAAGCTGGTGCAGCGCGCGTTCGAGAAACAGGGTCTTCACCGAAAGACCAG
TAAGAACCTGAACATCTGGACCATCAAGGTTTCAGGTCCTCGCAAGACAAAAGAGCTCAAGGCTTACCTGCTTCAGGATC
CCAAACTGCTGTTCCCTGTACAGCCTCTGGACAACCCAAGCCTCACGGTCATCACCGATGCCGAAGGGGATGTCGAATGA

Protein sequence :
MFQLLSWISRKPSPTPPTKAAPGVFLLPLSSTELLDTPRRRQLLENIWQRASLSKQQFEEIYRRPLANYAELVQQLPASE
NHHHAHPGGMIDHGLEIVAYALKVRQTYLLPIGAAPESQSAQTEAWSAAAAYGALAHDLGKIVVDLQVELQDGSTWHPWN
GPINQPYRFKYVKSREYQLHGAASALLIHQLLPRTALDWLSRFPELWAQLIYLFAGQYEHAGILGEIIVKADQASVAQEL
GGNPDRALAAPKQSLQRQLADGLRFLVKDKFKLNQPGGPSDGWLTQDALWLVSKPAADQLRAYLLAQGIEGVPSSNASFF
NMLQDQAVIQTNAEDKAIWTATIDNGAGWRNKFTLLKIAPALIWADPAERPDSYSGSLVIEEGNASSEKPETTCEIPNDS
IEQRQAPEAKMTLRQPTPSVAKPSNEMRAIAKPSAEDQEETDDLYALLGNINSPPEELDTSHDSPAASSTNTRGEENLQQ
PLGTKEPTDCAPEAVEDVFMPSRSTDLGQGFVGWMKSGIAARRLFINDTKALVHTVDGTAMLVTPGIFKRYVQEHPELEK
LAQAKETTGWKLVQRAFEKQGLHRKTSKNLNIWTIKVSGPRKTKELKAYLLQDPKLLFPVQPLDNPSLTVITDAEGDVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13343.1 hypothetical protein Not tested PAGI-5 Protein 0.0 98
EXA2 ABD94612.1 conserved hypothetical protein Not tested ExoU island A Protein 0.0 95
RL003 AAP84130.1 pathogenesis-related protein Not tested PAPI-1 Protein 0.0 94
pph99 CAI36140.1 predicted HD-superfamily hydrolase Not tested PPHGI-1 Protein 1e-145 56
ORF C36 AAN62129.1 conserved hypothetical protein Not tested PAGI-2(C) Protein 3e-142 51
ORF SG44 AAN62266.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 3e-142 50