Gene Information

Name : M062_04805 (M062_04805)
Accession : YP_008131410.1
Strain : Pseudomonas aeruginosa RP73
Genome accession: NC_021577
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1023947 - 1025230 bp
Length : 1284 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGACGCCGCAGCAGCTCACCGAGGAGTACATCTTCGCGCACGATCTCCGAGAAGCCAGCGCGAAGATCTACCGCGCCGC
AACCAAAGCGCTACTCAAGCACTTCGGCCCCACGGCAACCGTACAGGACGTGGATCACAGGGCCGTCCTGGGATGGCGGC
GCAAGGTACTGGAACAAGGCCTGTCGAAGCGGAGCTGGAACACGTACTCGAACCACCTGCGCACGATCTGGGGCTACGCC
ATCGAGCACGAGCTGGTGACGCACTCCCAGGTCAACCCATTCCGAAAGACCACCGTGATTCCCCCCAGGCGAGCAAGCAA
AACTGTCGCCGCCGAAGCCATCCTGCGCGCTCGCAGTTGGCTCAGCATGCAAGTCGGCGCCGAGCGCTGCACCGGCGATC
GTGCACGCATCACTCCCGCCTGGTTCTGGCTTTGCACGTTTGAGGTCTTCTACTACACCGGCATCCGGTTGAATGCGCTG
CTGTGCATCCGCAAGCGCGACATCGACTGGGATAATCAACTGATCCTCATCCGCGGCGAGACAGAGAAAACTCATAAAGA
GTTCGTAGTGCCAATAACGGAGGGGCTTGTGCCTCACCTATCGCGGCTCCTGCAGGAAGCCGAGAAAGCCGGATTCGCCG
ATGACGATCAGTTGTTCAACGTCAACCGGTTCTCACCGCATTACAAGAGCAAGACGATGAACTCCGACCAGGTCGAGGCC
ATGTACCGGAAGTTGACCGAGAAGGTTGGGGTGCGGATGACCCCGCACCGTTTCCGGCACACCCTGGCCACCGACTTGAT
GAAGGCACCCGAGCGGAACATCCATCTCACGAAGTGCCTGCTCAACCACTCGAATATCCAGACCACGATGAGCTACATCG
AGGCCGACTACGACCACATGCGTGCCGTGCTGCATGCTAGAAGCCTGGCCCAAGGCGCGCTGGAGAACGTCAGAAAGGTG
GATTACAGCGGCTCTCCGCAAGCCTCTGCCAAACCGAAGCCATGCGGGCAACCTCTCGCTCGAGTGGGTGAAGTGCCGCC
ACCTGAGGCCAGGACAGAACCGTCAGAACCAAGGGAGCACACACAAGAGACAGGCATTCAGAGAGGTCCAACCTCGTGGG
AAGCAGAAGCGGTACCACAGCCACCTGACACCTTCGAGCAAAGCGTGCTGTTCACTCTGATGGCTCAACACTTATCGAAC
CGTGCCGCCACTGCATCCGCGGTTCCCGCCGCAACAAGCGGATCTGGTGGAAGGGGATCTGCCGCCCGAGACAGTCTCGC
CTAG

Protein sequence :
MTPQQLTEEYIFAHDLREASAKIYRAATKALLKHFGPTATVQDVDHRAVLGWRRKVLEQGLSKRSWNTYSNHLRTIWGYA
IEHELVTHSQVNPFRKTTVIPPRRASKTVAAEAILRARSWLSMQVGAERCTGDRARITPAWFWLCTFEVFYYTGIRLNAL
LCIRKRDIDWDNQLILIRGETEKTHKEFVVPITEGLVPHLSRLLQEAEKAGFADDDQLFNVNRFSPHYKSKTMNSDQVEA
MYRKLTEKVGVRMTPHRFRHTLATDLMKAPERNIHLTKCLLNHSNIQTTMSYIEADYDHMRAVLHARSLAQGALENVRKV
DYSGSPQASAKPKPCGQPLARVGEVPPPEARTEPSEPREHTQETGIQRGPTSWEAEAVPQPPDTFEQSVLFTLMAQHLSN
RAATASAVPAATSGSGGRGSAARDSLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13342.1 tyrosine recombinase xerC-like protein Not tested PAGI-5 Protein 0.0 96
int ABD94670.1 putative integrase Not tested ExoU island A Protein 0.0 96
xerC AAP82947.1 integrase Not tested PAPI-2 Protein 0.0 95
xerC AAP84129.1 integrase Not tested PAPI-1 Protein 0.0 95
xerC CAI36141.1 putative integrase XerC Not tested PPHGI-1 Protein 4e-95 53