Gene Information

Name : M062_03030 (M062_03030)
Accession : YP_008131069.1
Strain : Pseudomonas aeruginosa RP73
Genome accession: NC_021577
Putative virulence/resistance : Virulence
Product : spermidine/putrescine ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 655578 - 656687 bp
Length : 1110 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGGCCGAGACTCAAGGCGGCGATGTGCTGGTCAGCTTCCGTGGCGTGCAGAAAAGCTACGACGGCGAGACCCTCATCGT
GAAGGATCTCAACCTGGACATTCGCAAGGGCGAATTCCTCACCCTGCTCGGCCCCTCCGGGTCCGGCAAGACCACCAGCC
TGATGATGCTGGCCGGTTTCGAAACCCCCACCGCCGGCGAAATCCTCCTGGCCGGTCGCTCGATCAACAATGTCCCTCCG
CACAAGCGCGACATCGGCATGGTGTTCCAGAACTATGCGCTGTTCCCGCACATGACCGTGGCCGAGAACCTGGCCTTTCC
CCTCAGCGTCCGTGGCATGAGCAAGACCGACGTGAAGGAAAGGGTCAAGCGCGCGTTGTCGATGGTCCAGCTCGACGCCT
TCGCCGGGCGTTATCCGGCGCAGCTTTCCGGTGGCCAGCAGCAGCGCGTGGCGCTGGCCCGCGCGCTGGTCTTCGAGCCG
CAACTGGTGCTGATGGACGAGCCCCTGGGAGCGCTGGACAAGCAACTTCGCGAGCACATGCAGATGGAAATCAAGCATCT
GCACCAGCGCCTCGGTGTCACCGTGGTCTACGTCACCCACGACCAGGGCGAGGCGCTGACCATGTCCGACCGGGTGGCGG
TGTTCCACCAGGGCGAAATCCAGCAGATCGAGCCGCCGCGCAATCTCTACGAGCAGCCGCGCAACACCTTCGTGGCCAAC
TTCATCGGTGAGAACAACCGTCTATCCGGGCAGCTTCTCAGTTGCGACGGCGAGCGCTGCGTGGTCGGACTGCCGCGCGG
CGAGAAGGTCGAGGCGCTGGCGGTCAACGTCGGCCAGCCGGGCGAGCCGGTGACCTTGTCGATCCGCCCCGAGCGGGTGC
GCCTGAACGGTGCCAGCGAGTCTTGCGTCAACCGTTTCTCCGGCCGCGTGGCCGAGTTCGTCTACCTGGGCGACCACGTG
CGTGTGCGCCTGGAGGTCTGCGGCCGCGACGACTTCTTCGTCAAGCAGCCGATCGCCGAGCTGGACCCGACGCTGAGCGT
CGGTGATGTGGTTCCGCTGGGCTGGCAGGTCGAGCATGTGAGGGCGCTCGACCCTCTGCCGGCGGCGTGA

Protein sequence :
MAETQGGDVLVSFRGVQKSYDGETLIVKDLNLDIRKGEFLTLLGPSGSGKTTSLMMLAGFETPTAGEILLAGRSINNVPP
HKRDIGMVFQNYALFPHMTVAENLAFPLSVRGMSKTDVKERVKRALSMVQLDAFAGRYPAQLSGGQQQRVALARALVFEP
QLVLMDEPLGALDKQLREHMQMEIKHLHQRLGVTVVYVTHDQGEALTMSDRVAVFHQGEIQQIEPPRNLYEQPRNTFVAN
FIGENNRLSGQLLSCDGERCVVGLPRGEKVEALAVNVGQPGEPVTLSIRPERVRLNGASESCVNRFSGRVAEFVYLGDHV
RVRLEVCGRDDFFVKQPIAELDPTLSVGDVVPLGWQVEHVRALDPLPAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-37 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M062_03030 YP_008131069.1 spermidine/putrescine ABC transporter ATP-binding protein VFG1206 Protein 6e-41 43