Gene Information

Name : M062_25175 (M062_25175)
Accession : YP_008135417.1
Strain : Pseudomonas aeruginosa RP73
Genome accession: NC_021577
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5428996 - 5429661 bp
Length : 666 bp
Strand : +
Note : response regulator in two-component regulatory system with QseC; regulates FlhCD which is the master regulator for flagella and motility genes; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGAGAATACTGCTGGCCGAGGACGACCTGCTGCTCGGCGACGGCATCCGCGCCGGGCTGCGCCTGGAAGGCGATACCGT
GGAATGGGTGACCGACGGCGTGGCCGCGGAGAACGCGCTGGTCACCGACGAGTTCGACCTGCTGGTGCTCGACATCGGAC
TGCCGCGCCGCAGCGGCCTGGACATCCTGCGTAACCTGCGCCACCAGGGCCGGCTCACCCCGGTGCTGCTGCTCACCGCG
CGGGACAAGGTGGCCGACCGGGTCGCCGGGCTCGACAGCGGTGCCGACGACTACCTGACCAAGCCCTTCGATCTCGACGA
ACTGCAGGCACGGGTGCGCGCCCTGACCCGCCGCACCACCGGTCGCGCCCTGCCGCAACTGGTGCACGGCGAGCTGCGCC
TGGACCCGGCGACCCACCAGGTGACCCTGTCCGGGCAGGCGGTGGAACTGGCGCCGCGCGAATACGCACTGCTGCGCCTG
CTGCTGGAGAACAGCGGCAAGGTGCTCTCGCGCAACCAACTGGAGCAGAGCCTCTACGGCTGGAGCGGCGACGTCGAGAG
CAACGCCATCGAAGTCCACGTCCACCACCTGCGGCGCAAGCTCGGCAACCAGTTGATCCGCACCGTCCGCGGCATCGGCT
ACGGCATCGACCAGCCGGCGCCCTGA

Protein sequence : 
MRILLAEDDLLLGDGIRAGLRLEGDTVEWVTDGVAAENALVTDEFDLLVLDIGLPRRSGLDILRNLRHQGRLTPVLLLTA
RDKVADRVAGLDSGADDYLTKPFDLDELQARVRALTRRTTGRALPQLVHGELRLDPATHQVTLSGQAVELAPREYALLRL
LLENSGKVLSRNQLEQSLYGWSGDVESNAIEVHVHHLRRKLGNQLIRTVRGIGYGIDQPAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 4e-30 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M062_25175 YP_008135417.1 transcriptional regulator BAC0487 Protein 2e-31 45
M062_25175 YP_008135417.1 transcriptional regulator NC_002516.2.879194.p Protein 4e-22 42
M062_25175 YP_008135417.1 transcriptional regulator NC_013450.8614146.p0 Protein 1e-24 42
M062_25175 YP_008135417.1 transcriptional regulator NC_002951.3238224.p0 Protein 1e-24 42
M062_25175 YP_008135417.1 transcriptional regulator NC_007793.3914065.p0 Protein 1e-24 42
M062_25175 YP_008135417.1 transcriptional regulator NC_002758.1121390.p0 Protein 1e-24 42
M062_25175 YP_008135417.1 transcriptional regulator NC_010079.5776364.p0 Protein 1e-24 42
M062_25175 YP_008135417.1 transcriptional regulator NC_002952.2859858.p0 Protein 1e-24 42
M062_25175 YP_008135417.1 transcriptional regulator NC_007622.3794948.p0 Protein 1e-24 42
M062_25175 YP_008135417.1 transcriptional regulator NC_003923.1003417.p0 Protein 1e-24 42
M062_25175 YP_008135417.1 transcriptional regulator BAC0308 Protein 4e-24 41
M062_25175 YP_008135417.1 transcriptional regulator CP000647.1.gene4257. Protein 1e-19 41
M062_25175 YP_008135417.1 transcriptional regulator BAC0533 Protein 1e-19 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M062_25175 YP_008135417.1 transcriptional regulator VFG0473 Protein 4e-34 46
M062_25175 YP_008135417.1 transcriptional regulator VFG1390 Protein 8e-30 43