Gene Information

Name : M062_24185 (M062_24185)
Accession : YP_008135229.1
Strain : Pseudomonas aeruginosa RP73
Genome accession: NC_021577
Putative virulence/resistance : Virulence
Product : macrolide ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5212108 - 5212794 bp
Length : 687 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
TTGATCTCCCTGCGGGGGATCGGCAAGGGCTACCTCCTGGGGGGGCAGCCGCTGCAGATACTGAAAGACGTCTGCCTGGA
CATCTTTCCCGGAGAAAGCTGCGCGATCGTCGGCGCGTCGGGCTCGGGCAAGAGCACCCTGCTGAATATCCTCGGCCTGC
TCGACCGCCCGGACAGCGGTGCCTACCGCTTCGCCGAGCACGACATCTTCAGCGTCGACGGGGACCGACTGGCGGCGATC
CGCAACCGCCTGATCGGCTTCGTCTTCCAGAGCTTCAACCTGTTGCCGCGGCTGAACGCGCTGGACAACGTCGCGCTGCC
CCTGAGCTATCGAGGGATGCCGCGCCGCGAGGCACTGGAGCGGGCCGAGGCGATGCTCGCCCGGGTCGGCCTGGCCGAGC
GCGCCGGCCATCGTCCGGCGGACCTTTCCGGCGGCCAGCGGCAGCGCGTCGCCATCGCTCGCGCGCTGGTCGGCGAGCCG
GCGCTGATCCTCGCCGACGAACCAACCGGCAACCTCGACGCGAGCACCGCGAAAGAAGTGCTGGAGCTGCTCCTCACCCT
CAACCGCGAGCGCCAGGTGACCCTGGTGGTGGTCACCCATGATCCCAGCCTGGCCGCCCGTCTCGGGCGCCAACTGACAG
TGCGGCATGGCGAGGTGCACGAGGACCTGGCGGAGGCCTGCCGGTGA

Protein sequence : 
MISLRGIGKGYLLGGQPLQILKDVCLDIFPGESCAIVGASGSGKSTLLNILGLLDRPDSGAYRFAEHDIFSVDGDRLAAI
RNRLIGFVFQSFNLLPRLNALDNVALPLSYRGMPRREALERAEAMLARVGLAERAGHRPADLSGGQRQRVAIARALVGEP
ALILADEPTGNLDASTAKEVLELLLTLNRERQVTLVVVTHDPSLAARLGRQLTVRHGEVHEDLAEACR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-25 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-26 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-26 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-26 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M062_24185 YP_008135229.1 macrolide ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-43 52
M062_24185 YP_008135229.1 macrolide ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 7e-48 50
M062_24185 YP_008135229.1 macrolide ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-34 45
M062_24185 YP_008135229.1 macrolide ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 4e-25 43
M062_24185 YP_008135229.1 macrolide ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 4e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M062_24185 YP_008135229.1 macrolide ABC transporter ATP-binding protein VFG2059 Protein 5e-15 42