Gene Information

Name : M062_23085 (M062_23085)
Accession : YP_008135015.1
Strain : Pseudomonas aeruginosa RP73
Genome accession: NC_021577
Putative virulence/resistance : Virulence
Product : XRE family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4977642 - 4978325 bp
Length : 684 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGCGAATACTGGTGGTCGAAGACAACCGCGACATCCTGGCCAACCTGGCCGATTACCTGTCGCTCAAGGGCTATACCGT
GGATTGCGCGCAGGACGGGCTGTCCGGCCTGCACCTGGCGGCCACCGAGCACTACGACCTGATCGTGCTCGACGTGATGC
TGCCGGGAATCGACGGCTATGCCCTGTGCCGGCGCCTGCGCGAAGACGCACGGCGCGATACCCCGGTGATCATGCTCACC
GCCCGCGACCAGTTGGACGATCGCCTGCAGGGGTTTCGTTCCGGAGCCGACGATTACCTGGTCAAGCCCTTCGCCCTTTC
CGAACTTTCCGCACGCATCGAGGCGGTGCTGCGTCGCGCCCAGGGTGGCGGCCGCCGCGAGCTGAGCGTGGCCGATCTCA
GCTATGACCTGGATACCCTGGAGGTCAAGCGCGCGGGCAAGTCGCTCAAGCTCAATCCGATCGGCCTAAAGCTGCTCGCC
GTGCTGATGCAGAAGAGCCCCCATGTGGTGCGCCGGGATGCCCTGGAAGAAGCGGTCTGGGGCGACGACTGCCCGGACAG
TGACAGCCTGCGCAGCCACGTCCATCAACTCCGTCAGGTGATCGACAAGCCATTCTCCGTGGCCTTGCTGCATACGGTGC
ATGGCGTCGGCTACCGCCTGGCGGAGGAGCCGAATGGAGTATAA

Protein sequence : 
MRILVVEDNRDILANLADYLSLKGYTVDCAQDGLSGLHLAATEHYDLIVLDVMLPGIDGYALCRRLREDARRDTPVIMLT
ARDQLDDRLQGFRSGADDYLVKPFALSELSARIEAVLRRAQGGGRRELSVADLSYDLDTLEVKRAGKSLKLNPIGLKLLA
VLMQKSPHVVRRDALEEAVWGDDCPDSDSLRSHVHQLRQVIDKPFSVALLHTVHGVGYRLAEEPNGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 7e-37 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 7e-36 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M062_23085 YP_008135015.1 XRE family transcriptional regulator BAC0125 Protein 8e-37 42
M062_23085 YP_008135015.1 XRE family transcriptional regulator BAC0197 Protein 6e-37 42
M062_23085 YP_008135015.1 XRE family transcriptional regulator BAC0487 Protein 7e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M062_23085 YP_008135015.1 XRE family transcriptional regulator VFG0596 Protein 3e-37 42
M062_23085 YP_008135015.1 XRE family transcriptional regulator VFG1390 Protein 1e-35 42