Gene Information

Name : M062_15015 (M062_15015)
Accession : YP_008133430.1
Strain : Pseudomonas aeruginosa RP73
Genome accession: NC_021577
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3243532 - 3244212 bp
Length : 681 bp
Strand : +
Note : response regulator in two-component regulatory system with CusS; regulates the copper efflux system; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGAAACTGCTGATCGTCGAAGACGAACCGCGCATCGGCCAGTACCTGCGCCAGGGGCTCGCCGAGGCAGGCTTCGCCGT
CGACCTGAGCGACGATGGCAACGAGGGCGAGCAACTGGCCCTGGGCGGCGACTACGACCTGCTGATCCTCGACGTCATGC
TGCCCGGCCGTGACGGCTGGCAGATCCTGCGCAGCGTGCGCGACGCCGGGATGACCGTACCGGTGCTGTTCCTGACCGCC
CGCGATGCCGTAGAGGACCGCGTGCGCGGCCTCGAACAAGGCGCCGACGATTACCTGGTGAAGCCGTTCGCCTTCGTCGA
ACTGCTCGCCCGGGTGCGCACCCTGCTGCGCCGGGGCAGCCAGCAGTTGCAGGAGACCACCCTGCAACTGGCCGACCTCG
AACTCGATTTGCTGCGCCGCCGGGTGCAACGCCAGGGCAAGCGGATCGACCTCACCGCCAAGGAGTTCGCCCTGCTCGAA
CTGCTGCTGCGGCGCAGCGGCGAGGTGCTGCCCAAGTCGCTGATCGCCTCGCAGGTCTGGGACATGAACTTCGACAGCGA
TACCAACGTCATCGAGGTGGCCATCCGCCGCCTGCGCGCCAAGGTCGACGACGACTACCCGCAGCGCCTGATCCATACCG
TGCGCGGCATGGGCTACGTTCTCGAAGAGCGCGACGAATGA

Protein sequence : 
MKLLIVEDEPRIGQYLRQGLAEAGFAVDLSDDGNEGEQLALGGDYDLLILDVMLPGRDGWQILRSVRDAGMTVPVLFLTA
RDAVEDRVRGLEQGADDYLVKPFAFVELLARVRTLLRRGSQQLQETTLQLADLELDLLRRRVQRQGKRIDLTAKEFALLE
LLLRRSGEVLPKSLIASQVWDMNFDSDTNVIEVAIRRLRAKVDDDYPQRLIHTVRGMGYVLEERDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-52 57
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-51 56

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M062_15015 YP_008133430.1 transcriptional regulator BAC0638 Protein 5e-61 73
M062_15015 YP_008133430.1 transcriptional regulator BAC0083 Protein 8e-67 72
M062_15015 YP_008133430.1 transcriptional regulator BAC0111 Protein 5e-64 64
M062_15015 YP_008133430.1 transcriptional regulator BAC0308 Protein 1e-60 62
M062_15015 YP_008133430.1 transcriptional regulator BAC0197 Protein 3e-58 60
M062_15015 YP_008133430.1 transcriptional regulator BAC0347 Protein 3e-56 59
M062_15015 YP_008133430.1 transcriptional regulator BAC0125 Protein 4e-58 59
M062_15015 YP_008133430.1 transcriptional regulator BAC0487 Protein 2e-26 42
M062_15015 YP_008133430.1 transcriptional regulator NC_002516.2.879194.p Protein 9e-25 42
M062_15015 YP_008133430.1 transcriptional regulator HE999704.1.gene1528. Protein 3e-25 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M062_15015 YP_008133430.1 transcriptional regulator VFG0596 Protein 1e-52 57
M062_15015 YP_008133430.1 transcriptional regulator VFG1390 Protein 1e-36 46
M062_15015 YP_008133430.1 transcriptional regulator VFG1389 Protein 2e-28 43
M062_15015 YP_008133430.1 transcriptional regulator VFG0473 Protein 1e-27 41