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Name : gabD (M062_01305) Accession : YP_008130726.1 Strain : Pseudomonas aeruginosa RP73 Genome accession: NC_021577 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehdyrogenase Function : - COG functional category : - COG ID : - EC number : 1.2.1.16 Position : 293379 - 294830 bp Length : 1452 bp Strand : + Note : catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGCAACTCAAAGATGCCAAGCTGTTCCGTCAACAAGCCTACGTCGATGGCGCCTGGGTGGATGCCGACAACGGCCAGAC CATCAAGGTGAACAACCCGGCCACCGGCGAGATCATCGGCAGCGTGCCGAAGATGGGCGCCGCCGAGACCCGCCGCGCCA TCGAGGCTGCCGACAAGGCCCTGCCGGCCTGGCGCGCGCTGACCGCCAAGGAGCGCGCCAACAAGCTGCGCCGCTGGTTC GACCTGATGATCGAGAACCAGGACGACCTGGCCCGCCTGATGACCATCGAGCAGGGCAAGCCGCTGGCCGAGGCCAAGGG CGAGATCGCCTACGCCGCCTCCTTCCTCGAATGGTTCGGCGAAGAAGCCAAGCGCATCTACGGCGACACCATTCCCGGCC ACCAGCCGGACAAGCGCATCATCGTGATCAAGCAGCCAATCGGCGTGACCGCGGCCATCACGCCGTGGAACTTCCCCTCG GCGATGATCACCCGCAAGGCCGGCCCGGCCCTGGCCGCCGGCTGCACCATGGTGCTCAAGCCTGCTTCGCAGACCCCGTA TTCCGCCCTGGCCCTGGCCGAACTGGCAGAGCGCGCCGGCATTCCGAAGGGCGTGTTCAGCGTGGTCACCGGTAGCGCCG GCGAAGTCGGCGGCGAGCTGACCAGCAACCCGATCGTGCGCAAGCTGACCTTCACCGGTTCCACCGAAATCGGCCGCCAA CTGATGGCCGAGTGCGCCCAGGACATCAAGAAGGTGTCCCTGGAGCTGGGCGGCAACGCGCCGTTCATCGTGTTCGACGA CGCCGACCTGGACGCCGCCGTCGAGGGCGCGCTGATTTCCAAGTACCGCAATAACGGCCAGACCTGCGTCTGCGCCAACC GCCTGTACGTGCAGGACGGCGTGTACGACGCCTTCGTCGACAAGCTGAAGGCCGCCGTGGCCAAGCTGAACATCGGCAAC GGCCTGGAAGCCGGCGTGACCACCGGTCCGCTGATCGACGCCAAGGCCGTGGCCAAGGTCGAGGAACACATCGCCGACGC GGTCTCCAAGGGCGCCAAGGTGGTTTCCGGCGGCAAGCCGCACGCCCTCGGCGGCACCTTCTTCGAGCCGACCATCCTGG TCGACGTGCCGAAGAACGCCCTGGTGTCCAAGGACGAGACCTTCGGCCCGCTGGCGCCGGTGTTCCGCTTCAAGGACGAG GCCGAGGTCATCGCCATGTCCAACGACACCGAGTTCGGCCTGGCGTCCTACTTCTACGCCCGCGACCTGGCCCGCGTGTT CCGCGTCGCCGAGCAACTGGAGTACGGCATGGTCGGCATCAACACCGGCCTGATCTCCAACGAAGTGGCGCCGTTCGGCG GCATCAAGGCCTCGGGCCTGGGCCGCGAAGGTTCCAAGTACGGGATCGAGGACTACCTCGAGATCAAGTACCTCTGCCTG GGCGGTATCTGA Protein sequence : MQLKDAKLFRQQAYVDGAWVDADNGQTIKVNNPATGEIIGSVPKMGAAETRRAIEAADKALPAWRALTAKERANKLRRWF DLMIENQDDLARLMTIEQGKPLAEAKGEIAYAASFLEWFGEEAKRIYGDTIPGHQPDKRIIVIKQPIGVTAAITPWNFPS AMITRKAGPALAAGCTMVLKPASQTPYSALALAELAERAGIPKGVFSVVTGSAGEVGGELTSNPIVRKLTFTGSTEIGRQ LMAECAQDIKKVSLELGGNAPFIVFDDADLDAAVEGALISKYRNNGQTCVCANRLYVQDGVYDAFVDKLKAAVAKLNIGN GLEAGVTTGPLIDAKAVAKVEEHIADAVSKGAKVVSGGKPHALGGTFFEPTILVDVPKNALVSKDETFGPLAPVFRFKDE AEVIAMSNDTEFGLASYFYARDLARVFRVAEQLEYGMVGINTGLISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYLCL GGI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 5e-167 | 69 |
