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Name : M062_05190 (M062_05190) Accession : YP_008131487.1 Strain : Pseudomonas aeruginosa RP73 Genome accession: NC_021577 Putative virulence/resistance : Virulence Product : secretin Function : - COG functional category : - COG ID : - EC number : - Position : 1094181 - 1095890 bp Length : 1710 bp Strand : - Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGCGTGCCCCCCTGAAGAACCTCTTGCCTTGCCTCCTGATCCCCGCGCTGGCCAGTTGCTCGGTCACGCGGGTGAACGA GTCGGCGGATCGTGTCGAAGCTACGGCAGATTCCGCGTCGACGATCGCAGCACAGATGCGCAACACCCGACCGGATCGCC GCGATACGGTGGTTTTCTCCGACAAACCCTGGGTCAGCACGAAGCCCCTGAGCGTTTCGCACACCTTGTCCAGTGACTGC ATCGTGACGTGGCGCCCTGCAGATGCAGCGTCGCTGCAGGAGGCCGCCCAGGAAGTCATCAACCAATGCCACCTGGCGGT CAGTATCACGCCCGACGCGCTGAACCCGGCCGCTTTTGCCCTGCAACCTCAGCAGCGCGCGAGCAACGCCCCGCCACCCA TCCAAGGCGGCCAGGACATGGCCACCATGCTGTTTCCTGCCTCCGTCGCCAACGGCATGTCCCTAGGTGCCGGCGGCAGC ATGGGGTCGAGCTTCGGGTCCTACGGCCCGCGGTCGCTGTACAACATCAAATGGAACGGCAAGGTCAGCGGGTTCCTCGA TCTCATCGCCGCCCGCGCCGGCGTGTCCTGGCGCTACAACCCAACCGAGAAGCGAGTCGAGTTCTACTACCTGGACACTC GGACCTTCCGCATCTACGCCTTCGACGACGTCAACACGGTGGACTCCACCGTGCGTTCCGGTATGACGACGGCCGCCGGC ATCAGCGGGGATGGCTCCGGATCCACTGGACAGAATGGCAGCTCCGGCATCAGCGGCGACTCCGGCAGCAAGCAGACCAC CAGCTCCGAGCTGAAGACCTCGATCCTCAGCGACATAGAGAACAGCATCAACTCGATGCTGACGCCGAGCATGGGACGCA TGTCGCTGTCGCGTGCCACGGGCACCCTGACCGTCACCGACCGACCAGAGGTCCTCAACCGCGTCCAGCAGCTGGTCAAC CGGGAGAACGAGAGCATCACCAAGCAGGTGCTGCTGAACGTCAACGTGCTCTCGGTCGCCCTGACCGACAAGGATCAACT GGGGATCGACTGGAACCTGGTCTACAAGTCGCTCAACAACAAGTGGGGCATCGGCCTGAAGAACACCATGCCGGGCATCG ACCAAAGTGCGATCTCCGGCTCCGTGAGCATCCTGGATACCGCCAACAGCGCCTGGGCAGGATCCAAGGCCATGGTCCAG GCGCTGGCCCAGCAGGGCCGCGTCTCGACCGTCCGCTCCCCGTCCGTGACCACGCTCAACCTCCAGTCGGCGCCGATCCA GATCGGCCGCTACGACAGCTACCTGGCCTCCAGCCAGATCTCCAACGTCGCCCAGGTCGGCAGTACCACCTCGCTGATCC CGGGCGCCGTGACCAGCGGCTACAACATGAGCCTGCTGCCGTTCGTGATGGAAAGCGGCGAGATGCTGCTGAAGATCAAC ATCAACATGACCTCCCGGCCGACGTTCGAAATGCAGACCAGCGGAGACTCCAAAGCCCAGTTCCCGAGCTACGACATCCA GCTGTTCGACCAGAAGGTACGCCTGCGCAGCGGCGAGACCTTGGTGCTCTCCGGCTTCGACCAGACCACCGAGGATACCA ACAAGGTCGGCACCGGCGACGCCGGATTCTTCGGCCTTGGCGGCGGGCTGACCCGCAATACCAAACGCGAGGTCATCGTG GTGCTGATCACCCCCGTCGTGCTGGGCTGA Protein sequence : MRAPLKNLLPCLLIPALASCSVTRVNESADRVEATADSASTIAAQMRNTRPDRRDTVVFSDKPWVSTKPLSVSHTLSSDC IVTWRPADAASLQEAAQEVINQCHLAVSITPDALNPAAFALQPQQRASNAPPPIQGGQDMATMLFPASVANGMSLGAGGS MGSSFGSYGPRSLYNIKWNGKVSGFLDLIAARAGVSWRYNPTEKRVEFYYLDTRTFRIYAFDDVNTVDSTVRSGMTTAAG ISGDGSGSTGQNGSSGISGDSGSKQTTSSELKTSILSDIENSINSMLTPSMGRMSLSRATGTLTVTDRPEVLNRVQQLVN RENESITKQVLLNVNVLSVALTDKDQLGIDWNLVYKSLNNKWGIGLKNTMPGIDQSAISGSVSILDTANSAWAGSKAMVQ ALAQQGRVSTVRSPSVTTLNLQSAPIQIGRYDSYLASSQISNVAQVGSTTSLIPGAVTSGYNMSLLPFVMESGEMLLKIN INMTSRPTFEMQTSGDSKAQFPSYDIQLFDQKVRLRSGETLVLSGFDQTTEDTNKVGTGDAGFFGLGGGLTRNTKREVIV VLITPVVLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13431.1 | putative PilN | Not tested | PAGI-5 | Protein | 0.0 | 99 |
| pilN2 | AAP84210.1 | PilN2 | Virulence | PAPI-1 | Protein | 0.0 | 99 |
| pilN | CAI36059.1 | type IV pilus protein | Not tested | PPHGI-1 | Protein | 3e-102 | 49 |
