|
Name : M062_05185 (M062_05185) Accession : YP_008131486.1 Strain : Pseudomonas aeruginosa RP73 Genome accession: NC_021577 Putative virulence/resistance : Virulence Product : type IV b pilus protein Function : - COG functional category : - COG ID : - EC number : - Position : 1092852 - 1094177 bp Length : 1326 bp Strand : - Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGGAGAAGCCTGACATCGGTAGCCGTGGACCAGACGTCTCGATCCTGAGCTACCACGGCAACAAGTTCGTCAGCGGCCT GTTCTGGCGGCCGCTATCCAGCCAGCGGCAGTACATGAAGGAAGCGCGCAAGCTGGGCAAGGAAGAGCATCTGGACATCG TTGCCATCCGCCATTCGCCGACAGTGATCCAGGCCGGCTTCGTTTCGAAGTCGCAAGGCGCAGTCAAGGGCATGTACTCC CTGGCCTCGGCGCTTTCAGGCCAGTTCGAAGGCGACTTCCTGGCCTGCTGGAAGGTCGACGAGGACCGCTACGCACTGGT CGCCACGCTCGATGGCGCGATCGTCCCCGGCCAGGACCTGGTCACCACCTTCGACGAAGCCAGGGACCGGATCAGGAAGC TCTCTACGCGCGGCGTGCTTCGAAACGCACAGGTCTTCGTTCCCGAAGGGTTCGATTTCCCCGTCAAGGACTTCGACATC GAGGAACTGCTCGCGCCGAAGCGCCTGCGGCGCGACTACCGCCTCCGGCAACTCACCTTCGGCTTGTCCGCCAGGGAGTG GACGGCAGTGGCCCTGCTCGGTTGCTTGGTAGGCGGGTCGCTAACCGCCTACTACCTATGGAATGCCCACCAGCAAGAGC TCGCCAGACAAGCCGCGCTCCTCGAGGAGCAGAGGCGCCTCGCCGAGCTGGCCGAGAAGAACGCCCAGGCCAAGCAGCCG CTGGACCTGGCGTCATTGCAGAAGCCTTGGACGCTCATGCCTGACCTCGAGGACATGCTACGCGCCTGTAGCAAGGCAAC GGGGGTACTGTCGCTGTCGATCCAGGGCTGGCTCTTCGAATCCAGCAAGTGCGACGGCAGGGTCCTGGTCGCCACCTACC ACCGTACCGGCAACAGCACGGCAGCCGACCTGACAGCGGCCAGCCAGCACCTGTTCGCTGACCGCCCCGCCTTTGTCATC GACAACGGCAACACCGCGGCCCTGAAGGTTGACCTGAAAGTCGCCATCGGTAGCGATGAGCCGCTGCAGCCAGCCGACGA CGCGCTGCAGGCGCTCACCAGCCATCTGTACCGTCAGGGTGTCGAGCCCAAGCTGTCGATCAGCCAGGAGACAACTCCGC CCCTTCCTGGCGCGGAAGCGGCGACGGAGCAGCAAGTGGTGTTGCCCTCCTGGAAGAAATTCACCTTCAGCGCCCAGACC AGGCTCCCGGCAGACCTGACCTTCCAGGGGCTGCCCGCCGCCGGGGTCCGCATCACCAACCTCGAAACCACGCTCAAGGA CAGCCAGTTGGACTGGACTGTCACAGGAGAAATCTATGCGAACTGA Protein sequence : MEKPDIGSRGPDVSILSYHGNKFVSGLFWRPLSSQRQYMKEARKLGKEEHLDIVAIRHSPTVIQAGFVSKSQGAVKGMYS LASALSGQFEGDFLACWKVDEDRYALVATLDGAIVPGQDLVTTFDEARDRIRKLSTRGVLRNAQVFVPEGFDFPVKDFDI EELLAPKRLRRDYRLRQLTFGLSAREWTAVALLGCLVGGSLTAYYLWNAHQQELARQAALLEEQRRLAELAEKNAQAKQP LDLASLQKPWTLMPDLEDMLRACSKATGVLSLSIQGWLFESSKCDGRVLVATYHRTGNSTAADLTAASQHLFADRPAFVI DNGNTAALKVDLKVAIGSDEPLQPADDALQALTSHLYRQGVEPKLSISQETTPPLPGAEAATEQQVVLPSWKKFTFSAQT RLPADLTFQGLPAAGVRITNLETTLKDSQLDWTVTGEIYAN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13430.1 | putative PilO2 | Not tested | PAGI-5 | Protein | 0.0 | 99 |
| pilO2 | AAP84209.1 | PilO2 | Virulence | PAPI-1 | Protein | 0.0 | 98 |
| pilO | CAI36060.1 | type IV pilus protein | Not tested | PPHGI-1 | Protein | 3e-72 | 42 |
