Gene Information

Name : M062_05050 (M062_05050)
Accession : YP_008131459.1
Strain : Pseudomonas aeruginosa RP73
Genome accession: NC_021577
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1073191 - 1073499 bp
Length : 309 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGAGCAAGCAACGACGTATGTTTTCCGCCGAGTTCAAACGAGAGGCTGCCGCCTTGGTGCTGGACCAAGGCTACAGCCA
TATCGACGCCTGCCGTTCGCTGGGGGTAGTGGATTCGGCCTTGCGCCGTTGGGTGAAGCAGCTCGAGGCGGAGCGCCAGG
GTGTGACCCCGAAGAGCAAGGCGTTGACGCCTGAGCAGCAAAAGATCCAGGAGCTGGAAGCCCGGATCAACCGGTTGGAG
CGGGAGAAAGCGATATTAAAAAAGGCTACCGCTCTCTTGATGTCGGACGAACTCAATCGTACGCGCTGA

Protein sequence :
MSKQRRMFSAEFKREAAALVLDQGYSHIDACRSLGVVDSALRRWVKQLEAERQGVTPKSKALTPEQQKIQELEARINRLE
REKAILKKATALLMSDELNRTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
RS05 AAP82950.1 putative transposase Not tested PAPI-2 Protein 2e-41 99
unnamed CAD42034.1 hypothetical protein Not tested PAI II 536 Protein 1e-21 59
l7045 CAD33744.1 - Not tested PAI I 536 Protein 2e-22 58
orfA CAE85179.1 OrfA protein, IS911 Not tested PAI V 536 Protein 2e-22 58
insN YP_002152325.1 transposase for insertion sequence element IS911 Not tested Not named Protein 3e-21 57
orfA AGK06911.1 IS1359 transposase; OrfA Not tested SGI1 Protein 2e-22 57
unnamed AGK06948.1 IS1359 transposase; OrfA Not tested SGI1 Protein 2e-22 57
orfA AGK06994.1 IS1359 transposase; OrfA Not tested SGI1 Protein 2e-22 57
orfA AGK07052.1 IS1359 transposase; OrfA Not tested SGI1 Protein 2e-22 57
VC1790 NP_231425.1 transposase OrfAB subunit A Not tested VPI-2 Protein 2e-22 57
orfA YP_001217330.1 transposase OrfAB subunit A Not tested VPI-2 Protein 2e-22 57
orfA ACX47959.1 IS1359 transposase; OrfA Not tested SGI1 Protein 2e-22 57
VPI2_0009c ACA01826.1 transposase OrfAB subunit A Not tested VPI-2 Protein 2e-22 57
api80 CAF28554.1 putative transposase Not tested YAPI Protein 1e-17 54
ECO111_3778 YP_003236113.1 putative IS602 transposase OrfA Not tested LEE Protein 2e-21 51
aec66 AAW51749.1 Aec66 Not tested AGI-3 Protein 1e-21 51
unnamed ACU09431.1 IS911 transposase orfA Not tested LEE Protein 5e-20 50
Z5088 NP_290240.1 hypothetical protein Not tested LEE Protein 5e-20 50
unnamed AAC31483.1 L0004 Not tested LEE Protein 4e-20 50
ECs4535 NP_312562.1 hypothetical protein Not tested LEE Protein 5e-20 50
ORF SG13 AAN62235.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 2e-13 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M062_05050 YP_008131459.1 transposase VFG1553 Protein 6e-22 59
M062_05050 YP_008131459.1 transposase VFG1485 Protein 7e-23 58
M062_05050 YP_008131459.1 transposase VFG1123 Protein 7e-23 57
M062_05050 YP_008131459.1 transposase VFG0784 Protein 2e-20 50