Gene Information

Name : M062_05045 (M062_05045)
Accession : YP_008131458.1
Strain : Pseudomonas aeruginosa RP73
Genome accession: NC_021577
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1072337 - 1073077 bp
Length : 741 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
GTGGCGCTACGCAGCCAGGTCAACCAGTTGTTCAGCCAGAGTCGGGGCTCGGCCGGCAGCCGCAGCATTCTGGGCATGCT
GCGCGAAGAGGGCGTGACCATCGGCCGTTTCCGAGTGCGTCGGTTGATGCGTGAGCTGGGCCTGGTTAGCAAGCAACCGG
GCTCGCACGCCTACAAACAGGCCACGGTTGAGCGGCCGGATATCCCGAATCGGCTGAACCGCGAATTCGCGACCGAGCAT
CCCAATCAGGTGTGGTGTGGCGACATCACCTACGTCTGGGCGCAAGGCCGTTGGCACTACCTGGCCGCGGTGCTGGATCT
GCATACCCGGCGGGTGATCGGCTGGGCGTTCTCGGCCAAGCCGGATGCCGAACTGGTGATCAAGGCCCTGGACATGGCCT
ACGAACAGCGCGGCAAGCCACAGCAGGTGCTGTTCCATTCAGACCAGGGCAGCCAGTACGCCAGCCGCCTGTTTCGGCAA
CGGCTCTGGCGCTATCGGATGCAGCAGAGCATGAGTCGCCGAGGGAATTGCTGGGATAACTCGCCGATGGAGCGCCTGTT
CCGCAGTCTGAAGTCGGAGTGGGTCCCGTCAACGGGTTACCTGACGGCGCAGGAGGCCCAACGGGACATCAGTCATTACT
TGATGCACCGCTACAACTGGATCAGGCCGCATCAATTCAACGACGGGTTACCACCTGCGGTGGCCGAAGAAAAACTCAAC
CCACTGTCCGGGATGGGTTGA

Protein sequence :
MALRSQVNQLFSQSRGSAGSRSILGMLREEGVTIGRFRVRRLMRELGLVSKQPGSHAYKQATVERPDIPNRLNREFATEH
PNQVWCGDITYVWAQGRWHYLAAVLDLHTRRVIGWAFSAKPDAELVIKALDMAYEQRGKPQQVLFHSDQGSQYASRLFRQ
RLWRYRMQQSMSRRGNCWDNSPMERLFRSLKSEWVPSTGYLTAQEAQRDISHYLMHRYNWIRPHQFNDGLPPAVAEEKLN
PLSGMG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
RS04 AAP82949.1 putative transposase Not tested PAPI-2 Protein 8e-109 98
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 9e-60 58
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 9e-60 58
Z5089 NP_290241.1 transposase Not tested LEE Protein 1e-62 57
unnamed ACU09432.1 IS911 transposase orfB Not tested LEE Protein 9e-63 57
unnamed AAC31485.1 L0006 Not tested LEE Protein 3e-60 57
ECs4537 NP_312564.1 hypothetical protein Not tested LEE Protein 4e-60 57
unnamed CAI43898.1 putative transposase Not tested LEE Protein 1e-62 56
aec65 AAW51748.1 Aec65 Not tested AGI-3 Protein 1e-62 56
ECO111_3779 YP_003236114.1 putative IS602 transposase OrfB Not tested LEE Protein 3e-66 55
orfB ACX47958.1 IS1359 transposase; OrfB Not tested SGI1 Protein 2e-65 54
orfB YP_001217329.1 transposase OrfAB subunit B Not tested VPI-2 Protein 3e-65 54
VPI2_0008c ACA01825.1 transposase OrfAB subunit B Not tested VPI-2 Protein 2e-65 54
orfB AGK06910.1 IS1359 transposase; OrfB Not tested SGI1 Protein 2e-65 54
overlap with orfA characteristic of IS3 family members AGK06947.1 IS1359 transposase; OrfB Not tested SGI1 Protein 2e-65 54
orfB AGK06993.1 IS1359 transposase; OrfB Not tested SGI1 Protein 2e-65 54
orfB AGK07051.1 IS1359 transposase; OrfB Not tested SGI1 Protein 2e-65 54
VC1789 NP_231424.1 transposase OrfAB subunit B Not tested VPI-2 Protein 3e-65 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M062_05045 YP_008131458.1 transposase VFG1484 Protein 5e-60 58
M062_05045 YP_008131458.1 transposase VFG0785 Protein 5e-63 57
M062_05045 YP_008131458.1 transposase VFG1122 Protein 1e-65 54