Gene Information

Name : M062_05020 (M062_05020)
Accession : YP_008131453.1
Strain : Pseudomonas aeruginosa RP73
Genome accession: NC_021577
Putative virulence/resistance : Unknown
Product : lytic transglycosylase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1068755 - 1069336 bp
Length : 582 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGGCAACGTCTGTAATCCGCGCCCTCCAACTGGCCGCCCTGCTGGTCCTGGCCAACATCGCTCAGGCCGCCGTGGATCC
ACCGCCGGCGTACAAGCAGATCGCCCTGCCCAAAGGGGTTCCGGCCGAGGTGCTCTACTCGGTCGCGCTGACCGAGAGCA
AGGTCCTGCTGCGCGGCGAATACGTTCCCTGGCCCTGGACATTGAACGTCGCCGGGAAATCCTACTACTACGCGACCCGC
ACCGCCGCCTGCACAGCGCTACTCGCGGCAATCAACCTCTACGGGGCCAAGAGCGTCGATTCCGGCCTCGGCCAGGTCAA
TATCGGCTGGAACGGACATCGTTTCTCCAGCCCCTGCGACTCCCTGGATCCGTACAAGAACCTGGACGCCACCTCCGACA
TCCTGGTCGAGCAGCGGGACGCCTTGTACGCATCCGCCCCTGGTAGGCCGGTGGACTGGATCCAGGTTGCCGGCCGCTAC
CACCGCCCCGCCGGCGGCGAGCCTGCCGCCAAGTACCGCAGGACGGTATCCCGCCACCTTAGCCAAGTCCTCGGCGTCAA
CCTGCTGGTGACCAATCCATGA

Protein sequence :
MATSVIRALQLAALLVLANIAQAAVDPPPAYKQIALPKGVPAEVLYSVALTESKVLLRGEYVPWPWTLNVAGKSYYYATR
TAACTALLAAINLYGAKSVDSGLGQVNIGWNGHRFSSPCDSLDPYKNLDATSDILVEQRDALYASAPGRPVDWIQVAGRY
HRPAGGEPAAKYRRTVSRHLSQVLGVNLLVTNP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13378.1 hypothetical protein Not tested PAGI-5 Protein 7e-65 97
RL050 AAP84175.1 conserved hypothetical protein Not tested PAPI-1 Protein 4e-65 97
EXA50 ABD94659.1 conserved hypothetical protein Not tested ExoU island A Protein 9e-65 95
pph70 CAI36111.1 soluble lytic murein transglycosylase Not tested PPHGI-1 Protein 2e-36 60
ORF SG70 AAN62292.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 9e-31 53
ORF C67 AAN62161.1 conserved hypothetical protein Not tested PAGI-2(C) Protein 4e-31 53
STY4559 NP_458645.1 hypothetical protein Not tested SPI-7 Protein 1e-20 51
t4257 NP_807855.1 hypothetical protein Not tested SPI-7 Protein 1e-20 51
PMI2591 YP_002152310.1 lytic transglycosylase Not tested Not named Protein 5e-23 47
YE3494A YP_001007653.1 hypothetical protein Not tested YAPI Protein 2e-19 45
YpsIP31758_3720 YP_001402674.1 transglycosylase Not tested YAPI Protein 4e-19 45
api25 CAF28499.1 conserved hypothetical protein Not tested YAPI Protein 3e-19 45