Gene Information

Name : cch (CA347_73)
Accession : YP_008126957.1
Strain : Staphylococcus aureus CA-347
Genome accession: NC_021554
Putative virulence/resistance : Unknown
Product : cassette chromosome helicase domain protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 80942 - 81811 bp
Length : 870 bp
Strand : -
Note : -

DNA sequence : 
GTGATTTCAACTTCTGAACATAGTATTTTCAAAAATCCAGCTAAAAATGATGGTTTGCGTGTTCGTACTATTGAGGTGTC
TGAAAAATTCACATCAAGTGCTCAAAACTCAGATACTATAAAAAAAGTGGTTAGTCAAAATAATGGTCATGTTTTACCTA
TAATTGCTCAATTCCTATTAGACAACACTAATGATGTTACTTCCCTTTTTCAAAAAGAAGACAGTGTTTTTTATCAATTA
CTATCAACTGAATCCAGTAACACTGGTATTCGAATGATTAAACATTATGCAACTCTAACAACAACAGCCCATATTTTAAA
TCAATCACTAGACCTACAGTTAAACGTTAGCAGCATAAAGAACTATTTATTAAGCTATCATAATGAAACGGTGTCAGAAC
GTTCTCTTGCAGATAAAGCGATGGATACAATCGTACAGTTTATTGCGGAAAACCTGGGCAAGTTTTCACAACAAACACGT
CTTGCTAATATGATTCAAAACTTTGGTATCCTCTCACTTAAAGATGACTACATCGAAGTAAAAATTATCCGAAATGTATT
CGATAAGATGTTAACAGACAGTCAATTCGAAGACACGAAAAATGTTATTGATGCTTTGGATAATGCAGGAAAATTAGTTT
CCGATCGGGATCGAAAGACAACAAAAAGAAATGCGAAAGATGATACAGGCAAAAGTACTTCTCTTGTCTTCTACCAAATC
AAAATTGATTTAGATTATGCTGACGTTCTTGGATTGCAATCCCAAGGACGCGACAACGTAATTCAAAAACATTCAAATCC
ATCACAGTTTAAAAACACAAACTTAGAGGAGTTTATGAAAAGTGAAAACACCACACTCATTGTGTTTTAG

Protein sequence : 
MISTSEHSIFKNPAKNDGLRVRTIEVSEKFTSSAQNSDTIKKVVSQNNGHVLPIIAQFLLDNTNDVTSLFQKEDSVFYQL
LSTESSNTGIRMIKHYATLTTTAHILNQSLDLQLNVSSIKNYLLSYHNETVSERSLADKAMDTIVQFIAENLGKFSQQTR
LANMIQNFGILSLKDDYIEVKIIRNVFDKMLTDSQFEDTKNVIDALDNAGKLVSDRDRKTTKRNAKDDTGKSTSLVFYQI
KIDLDYADVLGLQSQGRDNVIQKHSNPSQFKNTNLEEFMKSENTTLIVF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAV0075 NP_370599.1 hypothetical protein Not tested Type-II SCCmec Protein 2e-130 100
SA0072 NP_373312.1 hypothetical protein Not tested Type-II SCCmec Protein 2e-130 100
SERP2484 YP_190027.1 hypothetical protein Not tested Type-II SCCmec Protein 2e-130 100
SAR0074 YP_039540.1 hypothetical protein Not tested Type-II SCCmec Protein 2e-130 100