Gene Information

Name : CA347_54 (CA347_54)
Accession : YP_008126938.1
Strain : Staphylococcus aureus CA-347
Genome accession: NC_021554
Putative virulence/resistance : Unknown
Product : radC-like JAB domain protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 60258 - 60575 bp
Length : 318 bp
Strand : -
Note : -

DNA sequence :
ATGAAGGAAATCAATATTGTTTCACTACAAATGATAAAAACAGATACATTAAGTTATCTAAAAAATCGTATTTCAAACCC
TGAGGATGCGGCAGAAATCATGCGTTCATTCATTGGAAACAGTGACCGAGAGCATCTCATTCTCATATGTATGAACAGTA
AAAATGAACCTACACATATTCAAACACTATCGATTGGATCTATTAACCAAACGGTGATTCACCCTAGAGAAATATTCAAA
ACAGCGATACTCAGTAACGCAAATAGTATAATGCTCGGTCATAATCATCCAAGTGGAGATGTATTAACCATAGTATAA

Protein sequence :
MKEINIVSLQMIKTDTLSYLKNRISNPEDAAEIMRSFIGNSDREHLILICMNSKNEPTHIQTLSIGSINQTVIHPREIFK
TAILSNANSIMLGHNHPSGDVLTIV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
truncated-radC NP_370581.1 hypothetical protein Not tested Type-II SCCmec Protein 2e-44 100
radC NP_373293.1 hypothetical protein Not tested Type-II SCCmec Protein 2e-44 100
SERP2505 YP_190047.1 RadC domain-containing protein Not tested Type-II SCCmec Protein 2e-44 100
unnamed BAB47668.1 hypothetical protein Not tested Type-III SCCmec Protein 5e-44 99
unnamed BAC53830.1 hypothetical protein Not tested SRImec-III and SCCmec-III region Protein 5e-44 99
unnamed BAB46978.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 1e-43 98
unnamed BAB47605.1 hypothetical protein Not tested Type-III SCCmec Protein 2e-35 74