Gene Information

Name : hsdM (CA347_430)
Accession : YP_008127313.1
Strain : Staphylococcus aureus CA-347
Genome accession: NC_021554
Putative virulence/resistance : Unknown
Product : type I restriction-modification system, M subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 464395 - 465951 bp
Length : 1557 bp
Strand : +
Note : -

DNA sequence :
ATGTCTATTACTGAAAAACAACGTCAGCAACAAGCTGAATTACATAAAAAATTATGGTCGATTGCGAATGATTTAAGAGG
AAACATGGATGCGAGTGAATTCCGTAATTACATTCTAGGCTTGATTTTCTATCGCTTCCTATCTGAAAAAGCGGAACAAG
AATACGCAGATGCCTTGGCAGGTGAAGATATCACGTATCAAGAGGCATGGGCAGACGAAGAATACCGTGAAGACTTAAAA
GCAGAATTAATTGATCAAGTCGGTTACTTCATTGAACCACAAGATTTATTCAGTGCGATGATTCGTGAAATTGAAACACA
AGATTTCGATATCGAACATCTGGCGACGGCAATTCGTAAAGTTGAAACATCAACACTAGGTGAAGAAAGTGAAAATGACT
TTATCGGACTGTTCAGCGATATGGACTTAAGTTCAACGCGACTAGGTAACAATGTCAAAGAACGTACTGCACTAATTTCC
AAAGTCATGGTTAATCTTGACGACTTACCATTCGTTCACAGTGACATGGAAATTGATATGTTAGGTGATGCATACGAATT
CCTTATCGGGCGATTTGCGGCGACAGCGGGTAAAAAAGCAGGCGAGTTCTATACACCACAACAAGTATCTAAGATACTGG
CGAAGATTGTCACAGACGGTAAAGATAAATTACGTCACGTGTATGACCCAACATGTGGTTCCGGTTCATTACTGTTACGT
GTAGGTAAAGAGACACAAGTGTATCGTTATTTCGGACAAGAACGTAACAATACCACTTACAACTTAGCGCGCATGAACAT
GTTATTACATGATGTACGTTATGAAAATTTCGATATCCGTAATGATGACACGTTGGAAAATCCAGCCTTTTTAGGTCATA
CATTTGATGCGGTTATTGCGAACCCACCATACAGTGCGAAATGGACAGCAGATTCAAAATTTGAAAATGACGAACGATTC
AGTGGTTACGGCAAACTTGCGCCAAAGTCTAAAGCAGACTTTGCCTTTATTCAACACATGGTACATTACCTAGACGATGA
AGGTACCATGGCAGTCGTACTCCCACATGGTGTATTATTCCGTGGGGCTGCAGAAGGTGTCATTCGTCGTTATTTAATTG
AAGAAAAGAACTACTTAGAAGCCGTGATTGGCTTACCAGCGAATATTTTCTATGGGACAAGTATTCCAACATGTATTTTA
GTATTTAAAAAATGTCGCCAACAAGACGACAACGTACTATTTATCGATGCATCCAATGATTTTGAAAAAGGAAAAAATCA
AAACCATTTAACCGATGCCCAAGTCGAACGAATTATTAACACATATAAGTGTAAAGAAACGATTGATAAATATAGCTACA
GCGCGACATTACAAGAGATTGCCGAGAACGATTATAACCTAAACATACCGAGATACGTTGATACATTCGAAGAAGAAGAA
CCGATTGACTTAGAGCAGGTCCAGCAAGATTTGAAAAATATCGATAAAGAAATCGCACAAGTTGAACAAGAAATCAATGC
ATACCTAAAAGAACTTGGGGTGTTGAAAGATGAGTAA

Protein sequence :
MSITEKQRQQQAELHKKLWSIANDLRGNMDASEFRNYILGLIFYRFLSEKAEQEYADALAGEDITYQEAWADEEYREDLK
AELIDQVGYFIEPQDLFSAMIREIETQDFDIEHLATAIRKVETSTLGEESENDFIGLFSDMDLSSTRLGNNVKERTALIS
KVMVNLDDLPFVHSDMEIDMLGDAYEFLIGRFAATAGKKAGEFYTPQQVSKILAKIVTDGKDKLRHVYDPTCGSGSLLLR
VGKETQVYRYFGQERNNTTYNLARMNMLLHDVRYENFDIRNDDTLENPAFLGHTFDAVIANPPYSAKWTADSKFENDERF
SGYGKLAPKSKADFAFIQHMVHYLDDEGTMAVVLPHGVLFRGAAEGVIRRYLIEEKNYLEAVIGLPANIFYGTSIPTCIL
VFKKCRQQDDNVLFIDASNDFEKGKNQNHLTDAQVERIINTYKCKETIDKYSYSATLQEIAENDYNLNIPRYVDTFEEEE
PIDLEQVQQDLKNIDKEIAQVEQEINAYLKELGVLKDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hsdM2 YP_186690.1 type I restriction-modification system, M subunit Not tested vSa¥â Protein 0.0 99
SAKOR_00415 YP_008490599.1 Type I restriction-modification system methylation subunit Not tested vSa¥á Protein 0.0 99
SAS0394 YP_042520.1 restriction enzyme modification protein Not tested vSa¥á Protein 0.0 99
hsdM NP_645209.1 type I site-specific deoxyribonuclease LldI chain hsdM Not tested vSa¥á Protein 0.0 99
hsdM YP_494443.1 type I restriction-modification system, M subunit Not tested vSa¥â Protein 0.0 99
SAKOR_01757 YP_008491945.1 Type I restriction-modification system methylation subunit Not tested vSa¥â Protein 0.0 99
hsdM YP_001332734.1 type I restriction-modification system, methyltransferase subunit Not tested vSa¥â Protein 0.0 99
hsdM NP_370955.1 type I site-specific deoxyribonuclease LldI chain Not tested vSa¥á Protein 0.0 98
hsdM1 YP_185366.1 type I restriction-modification system, M subunit Not tested vSa¥á Protein 0.0 98
hsdM YP_001331432.1 type I restriction-modification system, methyltransferase subunit Not tested vSa¥á Protein 0.0 98
SAMSHR1132_03780 YP_005324900.1 putative type I restriction enzyme modification protein Not tested vSa¥á Protein 0.0 98
ORF6 BAC22943.1 - Not tested etd PI Protein 0.0 98
hsdM YP_493119.1 type I restriction-modification system, M subunit Not tested vSa¥á Protein 0.0 98
SAS1732 YP_043848.1 type I restriction enzyme modification protein Not tested vSa¥â Protein 0.0 98
hsdM NP_646568.1 hypothetical protein Not tested vSa¥â Protein 0.0 98
hsdM NP_373642.1 type I site-specific deoxyribonuclease LldI subunit HsdM Not tested vSa¥á Protein 0.0 98
SAV1808 NP_372332.1 type I restriction enzyme EcoR124II M protein Not tested vSa¥â Protein 0.0 98
SA1626 NP_374915.1 hypothetical protein Not tested vSa¥â Protein 0.0 98
SAR0433 YP_039884.1 type I restriction enzyme modification protein Not tested vSa¥á Protein 0.0 98
SAR1899 YP_041281.1 type I restriction modification system modification protein Not tested vSa¥â Protein 0.0 98
SAMSHR1132_16570 YP_005326167.1 restriction-modification system, M subunit Not tested vSa¥â Protein 0.0 97
SSP0053 YP_300143.1 type I restriction-modification system methyltransferase subunit Not tested SCC15305cap Protein 0.0 87