Gene Information

Name : lukF (CA347_2501)
Accession : YP_008129297.1
Strain : Staphylococcus aureus CA-347
Genome accession: NC_021554
Putative virulence/resistance : Virulence
Product : leukocidin-F subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2532657 - 2533634 bp
Length : 978 bp
Strand : +
Note : -

DNA sequence : 
ATGAACATGAATAAATTAGTCAAATCATCCGTTGCTACGTCTATGGCATTATTATTACTTTCTAATACTGCAAATGCTGA
AGGCAAAATCACACCAGTTAGCGTCAAAAAAGTAGATGATAAAGTTACTTTATACAAAACTACAGCTACAGCAGATTCAG
ATAAATTCAAAATTTCACAGATTTTAACATTCAATTTCATCAAAGATAAAAGTTATGATAAAGATACTTTAGTGCTTAAA
GCTGCAGGTAATATTAACTCAGGTTATGAAAGACCAAATCCTAAAGACTACGACTTTTCAAAAATATATTGGGGTGCAAA
ATACAATGTGTCTATCAGTTCACAATCTAATGATTCGGTTAACGTAGTAGACTATGCACCTAAAAATCAAAATGAAGAAT
TTCAAGTTCAAAACACTTTAGGCTATACATTCGGTGGTGACATTAGTATCTCTAATGGTTTATCTGGCGGACTTAACGGA
AACACTGCTTTTTCTGAAACAATCAATTACAAACAAGAAAGTTACAGAACAACTTTAAGTCGCAACACAAATTATAAAAA
TGTCGGTTGGGGTGTAGAAGCACATAAAATTATGAATAATGGTTGGGGGCCTTATGGACGAGATAGCTTCCACCCAACAT
ATGGTAATGAACTCTTCTTAGCTGGCAGACAAAGCAGTGCATACGCTGGCCAAAACTTCATAGCGCAACACCAAATGCCA
TTACTATCAAGAAGCAACTTTAATCCAGAATTTTTAAGCGTGCTATCACACAGACAAGATGGCGCTAAAAAATCTAAAAT
TACAGTAACTTATCAACGTGAAATGGACTTATACCAAATTCGTTGGAATGGCTTCTACTGGGCAGGCGCGAATTATAAAA
ACTACAAAACAAGAACATTCAAATCAACATATGAAATCGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAA
ACTGAAATCAATAAATAG

Protein sequence : 
MNMNKLVKSSVATSMALLLLSNTANAEGKITPVSVKKVDDKVTLYKTTATADSDKFKISQILTFNFIKDKSYDKDTLVLK
AAGNINSGYERPNPKDYDFSKIYWGAKYNVSISSQSNDSVNVVDYAPKNQNEEFQVQNTLGYTFGGDISISNGLSGGLNG
NTAFSETINYKQESYRTTLSRNTNYKNVGWGVEAHKIMNNGWGPYGRDSFHPTYGNELFLAGRQSSAYAGQNFIAQHQMP
LLSRSNFNPEFLSVLSHRQDGAKKSKITVTYQREMDLYQIRWNGFYWAGANYKNYKTRTFKSTYEIDWENHKVKLLDTKE
TEINK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAKOR_01767 YP_008491955.1 Leukocidin F subunit lukD Virulence vSa¥â Protein 4e-104 77
lukD NP_372343.2 leukotoxin F-subunit Virulence vSa¥â Protein 4e-104 77
lukD NP_374926.1 leukotoxin, LukD Virulence vSa¥â Protein 4e-104 77
lukD YP_186707.1 leukotoxin LukD Virulence vSa¥â Protein 3e-104 77
lukD NP_646584.1 leukotoxin Virulence vSa¥â Protein 3e-104 77
lukD YP_001332752.1 leukocidin LukD precursor Virulence vSa¥â Protein 3e-104 77
lukD YP_494459.1 leukotoxin LukD Virulence vSa¥â Protein 3e-104 77
lukF-PV YP_494078.1 Panton-Valentine leukocidin, LukF-PV Virulence ¥ÕSa2 Protein 3e-92 74
lukF NP_646195.1 Panton-Valentine leukocidin chain F precursor Virulence ¥ÕSa2 Protein 3e-92 74
SAOV_1908 YP_005737353.1 Panton-Valentine leukocidin LukF-PV chain precursor Virulence ¥ÕSa3 Protein 2e-90 71

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lukF YP_008129297.1 leukocidin-F subunit VFG1275 Protein 2e-127 97
lukF YP_008129297.1 leukocidin-F subunit VFG1276 Protein 1e-92 74