Gene Information

Name : pdp (CA347_2216)
Accession : YP_008129023.1
Strain : Staphylococcus aureus CA-347
Genome accession: NC_021554
Putative virulence/resistance : Unknown
Product : pyrimidine-nucleoside phosphorylase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2245036 - 2246337 bp
Length : 1302 bp
Strand : -
Note : -

DNA sequence :
ATGAGAATGATAGATATTATTGAGAAAAAACGTGACGGTCATGCATTAACTACTGAAGAAATTAATTTCTTTATTGATGG
GTATGTTAAAGGGGATATTCCTGATTACCAAGCATCAAGTTTAGCAATGGCGATTTATTTCCAAGATATGAATGATGATG
AGCGTGCAGCATTAACGATGGCTATGGTTAATTCTGGTGATATGATAGATTTGAGTGATATTAAAGGTGTCAAAGTAGAT
AAGCACTCAACAGGTGGTGTAGGAGATACAACTACATTGGTTTTAGCCCCATTAGTAGCAGCTGTAGATGTTCCTGTTGC
AAAAATGAGTGGGCGTGGATTAGGTCATACAGGTGGTACAATTGATAAATTAGAAGCAATTGATGGTTTTCATGTTGAAA
TAGATGAAGCAACATTTGTGAAATTGGTTAATGAAAATAAAGTGGCAGTTGTAGGACAATCAGGAAATTTAACTCCTGCA
GACAAAAAATTATATGCCTTAAGGGATGTTACTGGTACCGTCAATTCAATACCATTAATTGCCTCTTCAATTATGAGTAA
AAAGATTGCCGCTGGTGCAGATGCAATTGTATTAGATGTAAAAACTGGTAGCGGTGCATTTATGAAAACATTAGAAGATG
CTGAAGCATTAGCGCACGCAATGGTACGTATTGGTAATAATGTGGGACGTAATACGATGGCGATTATTTCTGATATGAAT
CAGCCACTTGGTCGTGCGATTGGCAATGCGCTTGAGTTACAAGAAGCAATTGATACGTTGAAAGGACATGGTCCGAAAGA
TTTAACAGAACTTGTACTAACATTAGGTTCTCAAATGGTTGTACTTGCAAACAAAGCTGAAACGCTTGAAGAAGCGAGAG
CATTGCTAATTGAGGCAATTGATTCAGGTGCAGCATTAGAAAAATTCAAAACATTTATTAAAAACCAAGGTGGCGACGAA
ACAGTTATTGACCATCCAGAGCGTTTGCCACAAGCTCAATATCAAATCGAATATAAAGCTAAAAAATCAGGTTATGTGAC
TGAGTTAGTCTCTAACGATATAGGTGTCGCTTCGATGATGTTAGGAGCGGGACGTTTAACAAAAGAGGATGATATTGATT
TAGCGGTTGGTATTGTTTTAAATAAAAAAATTGGGGATAAAGTAGAAGAAGGAGAATCATTATTAACGATTCACAGTAAT
CGCCAAGATGTAGACGATGTTGTTAAAAAATTAGATTCAAGTATAACAATTGCTGATCATGTTGTATCGCCTACATTAAT
TCATAAAATCATTACAGAGTAG

Protein sequence :
MRMIDIIEKKRDGHALTTEEINFFIDGYVKGDIPDYQASSLAMAIYFQDMNDDERAALTMAMVNSGDMIDLSDIKGVKVD
KHSTGGVGDTTTLVLAPLVAAVDVPVAKMSGRGLGHTGGTIDKLEAIDGFHVEIDEATFVKLVNENKVAVVGQSGNLTPA
DKKLYALRDVTGTVNSIPLIASSIMSKKIAAGADAIVLDVKTGSGAFMKTLEDAEALAHAMVRIGNNVGRNTMAIISDMN
QPLGRAIGNALELQEAIDTLKGHGPKDLTELVLTLGSQMVVLANKAETLEEARALLIEAIDSGAALEKFKTFIKNQGGDE
TVIDHPERLPQAQYQIEYKAKKSGYVTELVSNDIGVASMMLGAGRLTKEDDIDLAVGIVLNKKIGDKVEEGESLLTIHSN
RQDVDDVVKKLDSSITIADHVVSPTLIHKIITE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
deoA YP_005163381.1 Thymidine phosphorylase Not tested Not named Protein 3e-74 48