Gene Information

Name : lukF (CA347_2097)
Accession : YP_008128912.1
Strain : Staphylococcus aureus CA-347
Genome accession: NC_021554
Putative virulence/resistance : Virulence
Product : leukocidin-F subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2125813 - 2126832 bp
Length : 1020 bp
Strand : -
Note : -

DNA sequence :
ATGATTAAACAAGTATGTAAAAATATTACAATCTGCAGTTTGGCGCTATCAACAGCTTTAACTGTGTTCCCAGCATCTTC
TTATGCAGAAATTAAATCTAAAATTACTACAGTTTCCGAGAAGAACCTTGATGGTGATACGAAGATGTATACACGTACGG
CTACAACGAGTGATACAGAGAAAAAAATCTCACAAAGCTTACAATTTAATTTTTTAACTGAGCCAAATTATGATAAAGAG
ACAGTATTTATTAAGGCGAAAGGTACAATTGGCAGTGGATTGAAAATTTTAAATCCAAATGGTTATTGGAATAGTACATT
AAGATGGCCTGGTTCTTATTCAGTCTCGATTCAAAACGTTGATGATAACAACAACAGTACAAATGTGACTGATTTTGCGC
CTAAAAATCAAGATGAATCAAGAGAAGTTAAATATACGTATGGCTATAAAACAGGTGGAGATTTTTCAATTAATCGTGGC
GGTTTAACTGGAAATATTACAAAAGAGAAAAATTATTCAGAGACAATTAGTTATCAACAACCATCTTACCGCACACTTAT
TGATCAACCTACAACAAATAAAGGTGTAGCTTGGAAAGTAGAAGCACATTCTATCAATAATATGGGACATGATCATACGA
GACAACTAACTAATGACAGTGATGATAGAGTGAAAAGTGAAATCTTTTCATTAACTCGAAACGGAAACTTATGGGCGAAA
GATAATTTCACGCCTAAAAATAAAATGCCTGTAACTGTGTCAGAAGGATTTAATCCAGAATTTTTAGCTGTAATGTCACA
CGATAAAAATGATAAAGGTAAATCAAGATTTATCGTTCATTATAAACGATCAATGGATGACTTTAAATTAGATTGGAACA
AACATGGTTTCTGGGGCTATTGGTCTGGTGAAAACCATGTAGATCAAAAAGAAGAAAAATTATCAGCATTATATGAAGTT
GATTGGAAGACACATGATGTAAAATTAATTAAAACATTTAATGATAAAGAAAAGAAATAA

Protein sequence :
MIKQVCKNITICSLALSTALTVFPASSYAEIKSKITTVSEKNLDGDTKMYTRTATTSDTEKKISQSLQFNFLTEPNYDKE
TVFIKAKGTIGSGLKILNPNGYWNSTLRWPGSYSVSIQNVDDNNNSTNVTDFAPKNQDESREVKYTYGYKTGGDFSINRG
GLTGNITKEKNYSETISYQQPSYRTLIDQPTTNKGVAWKVEAHSINNMGHDHTRQLTNDSDDRVKSEIFSLTRNGNLWAK
DNFTPKNKMPVTVSEGFNPEFLAVMSHDKNDKGKSRFIVHYKRSMDDFKLDWNKHGFWGYWSGENHVDQKEEKLSALYEV
DWKTHDVKLIKTFNDKEKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lukD NP_372343.2 leukotoxin F-subunit Virulence vSa¥â Protein 1e-44 41
lukD NP_374926.1 leukotoxin, LukD Virulence vSa¥â Protein 1e-44 41
lukD YP_186707.1 leukotoxin LukD Virulence vSa¥â Protein 9e-45 41
lukD NP_646584.1 leukotoxin Virulence vSa¥â Protein 9e-45 41
lukD YP_001332752.1 leukocidin LukD precursor Virulence vSa¥â Protein 9e-45 41
lukD YP_494459.1 leukotoxin LukD Virulence vSa¥â Protein 9e-45 41
SAKOR_01767 YP_008491955.1 Leukocidin F subunit lukD Virulence vSa¥â Protein 1e-44 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lukF YP_008128912.1 leukocidin-F subunit VFG1275 Protein 2e-44 41