Gene Information

Name : sph (CA347_2096)
Accession : YP_008128911.1
Strain : Staphylococcus aureus CA-347
Genome accession: NC_021554
Putative virulence/resistance : Virulence
Product : sphingomyelin phosphodiesterase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2124732 - 2125556 bp
Length : 825 bp
Strand : +
Note : -

DNA sequence : 
ATGTATCCAAACTGGGGTCAATATAAGCGTGCTGATTTAATTGGACAATCTTCTTACATCAAAAATAATGATGTCGTCAT
ATTTAATGAAGCATTTGATAATGGTGCATCAGACAAATTATTAAGTAATGTAAAAAAAGAATATCCTTACCAAACACCTG
TACTCGGTCGTTCTCAATCAGGTTGGGACAAAACTGAAGGTAGCTACTCATCAACTGTTGCTGAAGATGGCGGCGTAGCG
ATTGTAAGTAAATATCCTATTAAAGAAAAAATCCAGCATGTTTTCAAAAGCGGTTGTGGATTCGACAATGACAGTAATAA
AGGCTTTGTTTATACAAAGATAGAGAAAAACGGTAAGAACGTTCACGTTATCGGTACACATACACAATCTGAAGATTCAA
GATGTGGCGCTGGACATGATCGAAAAATTAGAGCTGAACAAATGAAAGAAATCAGCGACTTTGTTAAAAAGAAAAACATA
CCTAAAGATGAAACGGTTTATATCGGTGGCGATTTGAATGTTAATAAAGGTACTCCAGAGTTCAAAGATATGCTTAAAAA
CTTAAACGTGAATGATGTTCTATATGCAGGACACAATAGCACATGGGATCCACAGTCAAATTCTATCGCGAAATATAATT
ATCCTAATGGTAAACCAGAACATTTAGACTATATATTTACAGATAAAGATCATAAACAACCAAAACAATTAGTTAATGAA
GTTGTTACTGAAAAACCTAAGCCATGGGATGTCTATGCCTTCCCTTACTACTATGTATACAATGATTTCTCAGATCATTA
TCCAATCAAAGCCTATAGTAAATAG

Protein sequence : 
MYPNWGQYKRADLIGQSSYIKNNDVVIFNEAFDNGASDKLLSNVKKEYPYQTPVLGRSQSGWDKTEGSYSSTVAEDGGVA
IVSKYPIKEKIQHVFKSGCGFDNDSNKGFVYTKIEKNGKNVHVIGTHTQSEDSRCGAGHDRKIRAEQMKEISDFVKKKNI
PKDETVYIGGDLNVNKGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYNYPNGKPEHLDYIFTDKDHKQPKQLVNE
VVTEKPKPWDVYAFPYYYVYNDFSDHYPIKAYSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlb NP_646757.1 truncated beta-hemplysin Not tested ¥ÕSa3 Protein 1e-124 100
hlb NP_375112.1 hypothetical protein Not tested ¥ÕSa3 Protein 5e-124 100
truncated-hlb NP_372527.1 hypothetical protein Not tested ¥ÕSa3 Protein 1e-123 99
unnamed CAA70683.2 sphingomyelinase-c Virulence LIPI-2 Protein 8e-68 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sph YP_008128911.1 sphingomyelin phosphodiesterase VFG1798 Protein 2e-126 99
sph YP_008128911.1 sphingomyelin phosphodiesterase VFG0674 Protein 4e-68 57