Gene Information

Name : hly (CA347_1076)
Accession : YP_008127935.1
Strain : Staphylococcus aureus CA-347
Genome accession: NC_021554
Putative virulence/resistance : Virulence
Product : alpha-hemolysin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1139001 - 1139960 bp
Length : 960 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAACACGTATAGTCAGCTCAGTAACAACAACACTATTGCTAGGTTCTATATTAATGAATCCTGTCGCTAATGCCGC
AGATTCTGATATTAATATTAAAACCGGTACTACAGATATAGGAAGCAATACTACAGTAAAAACAGGTGATTTAGTCACTT
ATGATAAAGAAAATGGCATGCACAAAAAAGTATTTTATAGTTTTATCGATGATAAAAATCACAATAAAAAAATATTAGTC
ATCAGAACGAAAGGTACCATTGCTGGTCAGTATAGAGTTTATAGCGAAGAAGGCGCTAATAAAAGCGGTTTAGCCTGGCC
TTCAGCATTTAAGGTACAATTGCAACTACCTGATAATGAAGTAGCACAAATTTCTGATTACTACCCTAGAAATTCAATTG
ATACTAAAGAATATATGAGTACATTAACTTATGGATTCAACGGTAACGTGACTGGTGATGATTCTGGAAAAATTGGCGGT
TTGATTGGTGCAAATGTTTCAATTGGTCATACACTCAAATATGTTCAACCAGATTTCAAAACAATTTTAGAAAGTCCAAC
TGATAAAAAAGTAGGTTGGAAAGTTATATTTAACAATATGGTGAATCAAAATTGGGGACCATATGACAGAGATTCTTGGA
ACCCAGTATATGGCAATCAACTTTTCATGAAAACAAGAAACGGTTCTATGAAAGCTGCAGATAACTTCCTTGATCCTAAC
AAAGCAAGTTCTCTATTATCTTCAGGGTTTTCACCAGACTTCGCTACAGTTATTACCATGGATAGAAAAGCAACCAAACA
ACAAACAAATATAGATGTAATATATGAACGTGTTCGTGATGACTATCAACTACATTGGACTTCAACAAATTGGAAAGGTA
CCAATACTAAAGATAAATGGACAGATCGTTCTTCTGAAAGATATAAAATCGATTGGGAAAAAGAAGAAATGACAAATTAA

Protein sequence : 
MKTRIVSSVTTTLLLGSILMNPVANAADSDINIKTGTTDIGSNTTVKTGDLVTYDKENGMHKKVFYSFIDDKNHNKKILV
IRTKGTIAGQYRVYSEEGANKSGLAWPSAFKVQLQLPDNEVAQISDYYPRNSIDTKEYMSTLTYGFNGNVTGDDSGKIGG
LIGANVSIGHTLKYVQPDFKTILESPTDKKVGWKVIFNNMVNQNWGPYDRDSWNPVYGNQLFMKTRNGSMKAADNFLDPN
KASSLLSSGFSPDFATVITMDRKATKQQTNIDVIYERVRDDYQLHWTSTNWKGTNTKDKWTDRSSERYKIDWEKEEMTN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlY YP_186036.1 alpha-hemolysin precursor Virulence vSa¥ã Protein 4e-144 99
SAUSA300_1058 YP_493756.1 alpha-hemolysin Not tested vSa¥ã Protein 4e-144 99
SAV1163 NP_371687.1 alpha-hemolysin Virulence vSa¥ã Protein 2e-144 99
SA1007 NP_374279.1 alpha-hemolysin Virulence vSa¥ã Protein 2e-144 99
MW1044 NP_645861.1 alpha-hemolysin Virulence vSa¥ã Protein 1e-144 99
SAKOR_01084 YP_008491272.1 Leukocidin F subunit Virulence vSa¥ã Protein 2e-144 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hly YP_008127935.1 alpha-hemolysin VFG1293 Protein 6e-145 99