Gene Information

Name : arsB (CA347_2804)
Accession : YP_008126872.1
Strain :
Genome accession: NC_021552
Putative virulence/resistance : Resistance
Product : arsenite/antimonite efflux pump membrane family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 14420 - 15709 bp
Length : 1290 bp
Strand : +
Note : -

DNA sequence :
ATGACTATTTTAGCAATTGTAATTTTTCTTTTAACTTTAACCTTTGTGATTTGGCAACCAAAAGGTTTAGATATTGGTAT
TACAGCTTTAATTGGAGCGGTTGTTGCTATCATTACAGGAGTCGTAAGTCTTTCTGATGTATTAGAAGTAACAGGTATTG
TTTGGAATGCAACTTTAACTTTTGTGGCTGTTATTCTTATTTCATTAATATTAGATGAAATTGGTTTTTTTGAATGGTCT
GCGATACATATGGTCAAGGCTTCAAACGGTAATGGCTTAAAAATGTTTGTTTTTATTATGTTACTTGGGGCAATTGTAGC
AGCATTTTTCGCAAATGATGGTGCAGCTTTAATCTTAACGCCTATTGTATTAGCGATGGTAAGGAATCTAGGATTTAATC
AAAAAGTGATTTTCCCCTTTATTATTGCCAGTGGTTTTATTGCTGATACTACATCACTTCCCTTAATTGTAAGTAACTTA
GTTAATATCGTTTCTGCAGATTACTTCGATATTGGATTTATTGAATATTTTAGCCGAATGATCATTCCTAATATATTCTC
TCTGATTGCTAGTATTCTCGTTTTATGGTTATATTTCAGAAAATCCATACCTAAAACGTTCGATACAGAAAATCTATCAG
ATCCTAAAAGTGCAATTAAAGATTCTAAGTTATTTAAGCTTTCATGGATAGTATTAGCAGTACTACTCGTTGGATATCTT
GTTAGCGAGTTTATCCAAATTCCTGTATCAATTATTGCTGGTATTATTGCTTTTATCTTTGTAATATTAGCTCGTAAATC
TAAAGCAGTTCATACAAAACAAGTGATTAAAGGTGCACCATGGAATATCGTTGTATTCTCTATTGGTATGTATCTTGTTG
TGTTTGGACTAAAAAATGTAGGTATTACAACGGTCCTTGGGGATGTTTTAACAAACATTTCAAATTATGGGTTATTTAGC
AGCATCATGGGTATGGGCTTTATAGCTGCTTTCTTATCTTCGATTATGAACAACATGCCAACTGTTTTAATAGATGCAAT
AGCGATTGGCCAATCCAGTGCTACAGGAATATTAAAAGAAGGCATGGTTTATGCGAATGTCATAGGTTCTGATTTAGGAC
CTAAAATTACGCCAATTGGTTCTTTAGCAACATTATTGTGGCTACATGTCTTAACACAAAAAGGTGTGAAGATTTCGTGG
GGAACATACTTTAAAACTGGAATTATCATCACTATTCCAGTCCTATTTGTAACACTCTTAGGTTTATACCTTACACTAAT
CATATTTTAA

Protein sequence :
MTILAIVIFLLTLTFVIWQPKGLDIGITALIGAVVAIITGVVSLSDVLEVTGIVWNATLTFVAVILISLILDEIGFFEWS
AIHMVKASNGNGLKMFVFIMLLGAIVAAFFANDGAALILTPIVLAMVRNLGFNQKVIFPFIIASGFIADTTSLPLIVSNL
VNIVSADYFDIGFIEYFSRMIIPNIFSLIASILVLWLYFRKSIPKTFDTENLSDPKSAIKDSKLFKLSWIVLAVLLVGYL
VSEFIQIPVSIIAGIIAFIFVILARKSKAVHTKQVIKGAPWNIVVFSIGMYLVVFGLKNVGITTVLGDVLTNISNYGLFS
SIMGMGFIAAFLSSIMNNMPTVLIDAIAIGQSSATGILKEGMVYANVIGSDLGPKITPIGSLATLLWLHVLTQKGVKISW
GTYFKTGIIITIPVLFVTLLGLYLTLIIF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 4e-157 94
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 7e-157 93
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 2e-156 91
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 1e-101 59

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
arsB YP_008126872.1 arsenite/antimonite efflux pump membrane family protein BAC0574 Protein 2e-165 99
arsB YP_008126872.1 arsenite/antimonite efflux pump membrane family protein BAC0575 Protein 2e-163 98
arsB YP_008126872.1 arsenite/antimonite efflux pump membrane family protein BAC0578 Protein 3e-100 59
arsB YP_008126872.1 arsenite/antimonite efflux pump membrane family protein BAC0576 Protein 2e-99 59
arsB YP_008126872.1 arsenite/antimonite efflux pump membrane family protein BAC0031 Protein 3e-98 58
arsB YP_008126872.1 arsenite/antimonite efflux pump membrane family protein BAC0577 Protein 9e-100 58