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Name : K756_04780 (K756_04780) Accession : YP_008123717.1 Strain : Haemophilus parasuis ZJ0906 Genome accession: NC_021521 Putative virulence/resistance : Unknown Product : Type I site-specific restriction-modification system, R (restriction) subunit-related helicase Function : - COG functional category : - COG ID : - EC number : - Position : 884599 - 887763 bp Length : 3165 bp Strand : - Note : COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases DNA sequence : ATGCTCATCAACGAAAACACCATTGAACAAGCCTGTTTGCGATTTTTGCAGGAATTGGGTTGGGATTATACGCACGGTTC GACCATCAATGCCGATGGGGAAAATCCTTGGCGGTTGCGGACGGACGAGGTGGTGTTTCGTTCGGTGTTGCGTGAGGCGG TGGAGCGGTTAAATCCGCAGTTGCCGTCTGCCACGGTGGACGAAGTGGTGGCGTTGGTGTGCAAAACGGATATTACGGAT TTAACGGAACGCAATCAGCAAGCCTATCGCTATTTGCGTGAGGGTGTTCGGGTGGAGTATCGGGAAAATGATGAGCAAAA AGTGGAGTTTGCCCGTTTGATTGATTTTCAACAGCCGAACCTGAACCGTTTTGATGTGGTGAACCAGCTGACGATTGCAG GGCGGAAGGGCAATCGCCGTCCTGATGTGATTTGTTATATCAATGGCTTGCCTGTGGTGGTGTTGGAGCTGAAAAATCCC TTGAAAGAGAATGCGGATTTGCCACAGGCGTTTAATCAGTTGCAGACGTATAAGCAGGAAATCGGCGATCTGTTTGTGTA TAACCAAGCCCTTGTGATCAGCGATGGTATTTTGGCGAAGGTCGGTTCGCTCACGGCGGATTTGGAGCGGTTTACCCCTT GGCGTGTGGTGGACGAGAAGAACAAGCAACGTATTTCCTTTGAACACGAGTTGGAAGGCTTGGTGCGTGGTTTGCTTAAC CCTGCGAGTTTGTTGGATTATATCCAGAATTTTATTGTGTTTGAGCAAACATCAAGCGGTCGTTTGGTGAAGAAAATTGC CGCTTATCATCAATTCTACGGCGTGAATGAAGCGGTGGATTGTACGCTGTGGGCGGCGAGCGAGCAGGGCAATGGCAAAA TCGGGGTGATGTGGCATACACAAGGTTCGGGCAAGTCGTTGTCGATGTTGTTTTATGCGGGCAAATTGTTGTCGCAAGCG GAGTTACGCAACCCGACTATTGTGGTCGTTACCGATCGCAATGATTTGGACGGTCAGCTTTATGCCACCTTTTCAGGCGG TCAGGCGTTAATTCGTCAGCAACCTGTGCAAGCAGACGGCAGGGAGGCGTTGCGTGAAGAACTTGCCAAGCGTGAAACAG GCGGTGTGATTTTTACCACTATTCAGAAATTCGGTTTGCAAGAGGGCGAGCAGGCTCACCCTGTGTTAAACGAACGACAC AATATTATTGTGATCAGCGATGAGGCTCACCGTTCGCAATATGGTTTTAGCCAAAGTGTGAAACTCAATGAGCTAAATCG CACAGGGACATACCGTGTCGGCTATGCAAAACATTTGCGTGATGCTTTGCCAAATGCCTCTTTTATTGGCTTTACTGGCA CGCCGATTAGTCTTGAAGATAAAGATACGCAGGAAGTGTTCGGTAAATATGTGTCGATTTACGATATTACCGATGCGGTG GAAGATGGGGCGACAGTGCCGATTATTTATGAAGCTCGACAAATTCCGATTGCACAGAGTGCCGAGTTTGATAATGTGGT GCAAGAAGCCCAAACGTTAATAGATGAAGATGATGAAAGTAGCTACAACTTCCGTTTGCGTGAAAAATTAATGGGAACAG AGGGGCGTTTGAGCCGTTTGGCAGAAGATTTTGTCAAACATTTTGAACAACGCACCGCTTTAATTGACGGCAAGGCAATG GTGGTGGCGATGAGCCGTCAGATTTGTGTGAAATTGTACGAAAAAATCACCGCACTTCGTCCAGAGTGGCATAGCGATGA TGTGAATGAAGGGGCGATTAAGATTGTGATGACGGGGTCGGCGAGCGATCCTGCGGACATTCAAAAACATATCTATTCTT CGCAAGATAAAAAGCTGTTGGAACGCCGTTTTAAAGATCCTGACGATCCGCTGAAAATTGTGATTGTGCGTGATATGTGG CTAACGGGTTTTGATGCTCCGTGTTGCAATACGATGTACATTGATAAGCCGATGAAAGGGCATAATTTAATGCAGGCGAT TGCACGGGTAAACCGTGTGTTCCGCAATAAAAGCCGTGATAATGGCGGTTTGATTGTGGATTATGTGGGGCTAACCAGCG AACTTCGAGAAGCGACAGAACAATATACTCGCTCGCACGGCAAAGGGCAGATGACCCACAATATCGCCGAAACTAAGGCA AAGATGTTGGAATATATTGATGTTGTGCGTGGGCAGTTTGCTACGCCTGTGAACGATCAGCCGTTTAAGCTGTTTGATGC CTTGAAAATTGAAGATGAACTGGCGTTGTTCAAGCAAGTAATGTTGGGGGCGAACCATATTCTTGCCTTAGATCATCAAA CGGTTGCGGATAAAACCGAGAAAACCCTAAGACGCAATGCGTTTTTAAAAGCGGTGCGTTTGGCGAAAAAAGGCTTTAGC TTATGCGGTGCAGACGGCGATGTTCAGCAGTACCAAAAAGAGCTTGCCTTTTATGATGCGGTGCGAGCGATTTTGGCAAA ACGTGAGCCAAATTCCACCGCTTCAAGCGAAGAACGTCAGTTGCAGTTGGTGGCATTATTAAATAAAGCGGTGGACGCAA GCGGTGCGATTAACCTGTTTGATTTGCTCAACCGTGAACAGCCGAATATTAATATTTTGTCGGAAGAGTTTTTAGAGAAA ATCAAAAACAGTCAAACCAAAGAGCTTTGGCTGTTGGCGGTGGAGCGTTATTTGCGTAGCCAAATCAATGAAAAAGGAAC AGGCAATTTGGCGGTGCAAAAAGATTTTGCCGAGCGTTTGAAACAGGCGTTAAATCAATACCACAACCAAAATCTCACCA TTATGCAAGTGTTGGAAGAGTTGCTGAATATGAGCAAGGAATTTACCGAACGCTTGCAACGTGGGGAGAAATTGGGTTTA TCGCCGGCAGAAATTGCCTTTTACGATGCCCTTGCTCGCAATGAAAGTGCGGTGCGAGAATTGGGCGATGATGCCTTGAA AAACTTGGCAAAAGCGATTACCGATAAATTACGCAAATCCGCCACCATTGACTGGCAATACAAAGAAGCCGTGCGAGCCA AAATGCGAAACTTGGTGCGTGTAACGTTGAGATTATTCAAATATCCACCGGATAAATGCGATGAAGCCATTCAATTTGTG TTGGAACAAGCGGAAGTGATTGCGGATGAATTGACGACGGTATAA Protein sequence : MLINENTIEQACLRFLQELGWDYTHGSTINADGENPWRLRTDEVVFRSVLREAVERLNPQLPSATVDEVVALVCKTDITD LTERNQQAYRYLREGVRVEYRENDEQKVEFARLIDFQQPNLNRFDVVNQLTIAGRKGNRRPDVICYINGLPVVVLELKNP LKENADLPQAFNQLQTYKQEIGDLFVYNQALVISDGILAKVGSLTADLERFTPWRVVDEKNKQRISFEHELEGLVRGLLN PASLLDYIQNFIVFEQTSSGRLVKKIAAYHQFYGVNEAVDCTLWAASEQGNGKIGVMWHTQGSGKSLSMLFYAGKLLSQA ELRNPTIVVVTDRNDLDGQLYATFSGGQALIRQQPVQADGREALREELAKRETGGVIFTTIQKFGLQEGEQAHPVLNERH NIIVISDEAHRSQYGFSQSVKLNELNRTGTYRVGYAKHLRDALPNASFIGFTGTPISLEDKDTQEVFGKYVSIYDITDAV EDGATVPIIYEARQIPIAQSAEFDNVVQEAQTLIDEDDESSYNFRLREKLMGTEGRLSRLAEDFVKHFEQRTALIDGKAM VVAMSRQICVKLYEKITALRPEWHSDDVNEGAIKIVMTGSASDPADIQKHIYSSQDKKLLERRFKDPDDPLKIVIVRDMW LTGFDAPCCNTMYIDKPMKGHNLMQAIARVNRVFRNKSRDNGGLIVDYVGLTSELREATEQYTRSHGKGQMTHNIAETKA KMLEYIDVVRGQFATPVNDQPFKLFDALKIEDELALFKQVMLGANHILALDHQTVADKTEKTLRRNAFLKAVRLAKKGFS LCGADGDVQQYQKELAFYDAVRAILAKREPNSTASSEERQLQLVALLNKAVDASGAINLFDLLNREQPNINILSEEFLEK IKNSQTKELWLLAVERYLRSQINEKGTGNLAVQKDFAERLKQALNQYHNQNLTIMQVLEELLNMSKEFTERLQRGEKLGL SPAEIAFYDALARNESAVRELGDDALKNLAKAITDKLRKSATIDWQYKEAVRAKMRNLVRVTLRLFKYPPDKCDEAIQFV LEQAEVIADELTTV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 51 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 42 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 42 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 41 |
