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Name : K756_03780 (K756_03780) Accession : YP_008123529.1 Strain : Haemophilus parasuis ZJ0906 Genome accession: NC_021521 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : - COG ID : - EC number : - Position : 719890 - 721809 bp Length : 1920 bp Strand : + Note : COG0550 Topoisomerase IA DNA sequence : ATGCGTTTATTCATTGCAGAAAAGCCAAGTTTAGGGCGTGCGATTGCTGATGTATTGCCGAAACCCCATACCCGTGGGGA CGGCTTTATTCAGTGTGGCGAAGACAATGTGGTTACTTGGTGTATCGGTCACTTGTTAGAACAAGCTGAACCTGATGCTT ATGATGAACGTTTCAAAATGTGGCGAATGGAACATTTGCCGATTATCCCTGAACAGTGGAAGCTGATCCCCAAAAAAGAG ACACTCAAGCAGTTTAAGGTGGTAGAGCGTTTAATTAAACAAGCGGATATTTTAGTCAATGCAGGCGACCCAGATCGTGA AGGACAACTGTTGGTGGACGAAGTTTTTGGCTACTTAAATTTATCCCCTGAGCGGAAATCCCAAATTCAGCGGTGTTTGA TTAGCGATCTCAACCCTAATGCTGTCAAAAAAGCGATTGAAAAATTGCAATTTAATCGAGATTTCGTACCGCTTGCTACA TCGGCTTTAGCTCGTGCAAGGGCAGACTGGCTATATGGGATCAATATGACCAGAGCCTATACGCTACAAGGGCGTTGGGC AGGTTATAAAGGCGTGCTTTCCGTTGGACGTGTACAAACGCCAGTGTTGGGCTTGATTGTCCGACGTGATCTTGAGATCG AAAATTTTATCCCAAAAGATTATTTTGAAGTGTTGGCAAATGTGGTTGTCTCTGAAACCCAAGAGCTTTTTCAAGCACAA TGGCAACCAAGTAAAGCCTGCGAAGATTATCAAGATGAAGATGGACGAGTACTTTCTCGCCCACTTGCTGAGAATGTGGT AAAACGTATCGCCGATCAAGCCGCTTGCGTTACCGAATATCAAGATAAAATGGAAAGTGAAGCAGCACCACTCCCTTATT CACTCTCAGCCTTGCAAATTGATGCGGCTCGCCGTTTTGGCTTATCTGCCCAAGATGTGCTTGATGTTTGCCAACGGCTG TATGAAACCCATAAATTGATTACTTACCCTCGTTCCGACAACCGTTATTTGCCGAATGAACATTTTGCCGACCGCCTAAA AGTGATGGCGGCAATTGCTTATCATCTGCCTGAGTATGCTCAAAAGCCCGATGCTGTTGATCCGAATAAGAAAAACCGTT GCTGGAATGACAGTAAGGTAGAAGCCCACCACGCTATTATCCCAACGGCACGTCAAGGGCAAGTTCACTTAACCCAAAAT GAACAGCGGATTTATCAGCTTATTGCTCGACAATATTTAATGCAGTTTTGCCCTGACGCAGAATATCGTAAAGGAAAAAT TGTGTTAAATATCGCAGGGGGGACTTTTGTTGCGCAAGCCAGAAACCTTGTTGTTGCAGGTTGGAAGTCCTTGTTAGGCA AAGAAGATAATGATGAAATCGTTGAACCTTTGCTACCTGTGGTTAAAAAAGATCAGCAGTTATGGTGTGAAAGCGGTGAG ATCGTCAGCAAAAAAACACAGCCCCCACGCCATTTTACTGATGCGACCTTGTTATCCGCAATGACGGGCATTGCTCGCTT TGTACAGGATAAACAGCTCAAAAAAGTGTTGAGGGAAACCGACGGCTTGGGTACAGAAGCCACCCGAGCTGGTATTATTG AATTATTATTCAAACGTGGCTTTTTAATCAAAAAAGGCAGAAACATTCATAGTACAGAAGCAGGACGAACCTTAATTAGT GCCTTGCCAGATGTTGCAACACAGCCTGATATGACAGCTCACTGGGAAATGCAACTAACAGACATCAGCAAAAAACAAGC CAGTTATCAACAATTTATGGCAGATTTAAACCAACGATTGCCGAGTTTATTACGTTCTCCAAATCAGCAGATTTTGCAAA ATTTGGCGAAAATAACACCGCTTACAATGGGTTCTAAATCACGTTATGCCCGTAAATCTACGCAAAATGTTGAAAAATAA Protein sequence : MRLFIAEKPSLGRAIADVLPKPHTRGDGFIQCGEDNVVTWCIGHLLEQAEPDAYDERFKMWRMEHLPIIPEQWKLIPKKE TLKQFKVVERLIKQADILVNAGDPDREGQLLVDEVFGYLNLSPERKSQIQRCLISDLNPNAVKKAIEKLQFNRDFVPLAT SALARARADWLYGINMTRAYTLQGRWAGYKGVLSVGRVQTPVLGLIVRRDLEIENFIPKDYFEVLANVVVSETQELFQAQ WQPSKACEDYQDEDGRVLSRPLAENVVKRIADQAACVTEYQDKMESEAAPLPYSLSALQIDAARRFGLSAQDVLDVCQRL YETHKLITYPRSDNRYLPNEHFADRLKVMAAIAYHLPEYAQKPDAVDPNKKNRCWNDSKVEAHHAIIPTARQGQVHLTQN EQRIYQLIARQYLMQFCPDAEYRKGKIVLNIAGGTFVAQARNLVVAGWKSLLGKEDNDEIVEPLLPVVKKDQQLWCESGE IVSKKTQPPRHFTDATLLSAMTGIARFVQDKQLKKVLRETDGLGTEATRAGIIELLFKRGFLIKKGRNIHSTEAGRTLIS ALPDVATQPDMTAHWEMQLTDISKKQASYQQFMADLNQRLPSLLRSPNQQILQNLAKITPLTMGSKSRYARKSTQNVEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 4e-109 | 42 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 4e-109 | 42 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 3e-109 | 42 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 1e-108 | 42 |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 4e-104 | 41 |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 3e-105 | 41 |
