Gene Information

Name : K756_01285 (K756_01285)
Accession : YP_008123081.1
Strain : Haemophilus parasuis ZJ0906
Genome accession: NC_021521
Putative virulence/resistance : Virulence
Product : chelated iron ABC transporter periplasmic-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 243304 - 244182 bp
Length : 879 bp
Strand : -
Note : COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin

DNA sequence : 
ATGAAAAAATTAGCAGCACTACTTAGTATGCTTTTTTTGGTAAGTAATCCACTTGCTGCCCAGCAGTTTAAAGTGGTCAC
CACATTCACTGTGATTCAAGACATTGCTCAAAATGTCGCAGGGGATAAGGCTGTGGTCGAGTCGATCACCAAACCAGGTG
CGGAAATCCACGATTATCAACCAACGCCACAGGATATTGTAAAAGCACAATCTGCGGATTTGGTGTTGTGGAACGGTATG
AACCTTGAAAGCTGGTTTGAGCGTTTCTTTGCTCAAGTGAAAGATAAACCTGCGGTTGTAGTAACGGAAGGTATTGAACC
GATTTCAATCTATGAAGGGCCTTACAAAGATAAACCAAACCCACACGCTTGGATGTCCACGAAAAATGCGTTGATTTATA
TTGAAAACATTCGCCAAGCCTTGGTGAAATACGATCCGGCAAATGCAGAAGCCTATAATGCGAATGCAAAGGCCTATGCC
GATAAGATCGTTGCCTTAGATCAGCCGTTGCGTGAGCGTTTGGCAAAAGTGCCTGAAGCACAACGTTGGTTAGTGACAAG
CGAAGGGGCGTTTAGCTATCTTGCTAGAGATTATGGCTTCAAAGAGTTATATCTTTGGGCGATTAACCAAGATGAACAAG
GCACGCCAAAACAGATCCGCAAAGTGATCGACCAAGTGCGTAAACATCAAATTCCAGTGGTATTTAGCGAAAGTACCATT
TCAGATAAACCAGCTAAACAAGTGGCGAAAGAGAGTAAAGCACGCTATGGCGGTGTGTTATATGTGGACTCTCTCTCAAC
AAAAGATGGCAAAGTACCAACCTATGTTGATTTACTCAATGTGACGGTAAGTACAATTGTTGCTGGATTTGAAAAATAA

Protein sequence : 
MKKLAALLSMLFLVSNPLAAQQFKVVTTFTVIQDIAQNVAGDKAVVESITKPGAEIHDYQPTPQDIVKAQSADLVLWNGM
NLESWFERFFAQVKDKPAVVVTEGIEPISIYEGPYKDKPNPHAWMSTKNALIYIENIRQALVKYDPANAEAYNANAKAYA
DKIVALDQPLRERLAKVPEAQRWLVTSEGAFSYLARDYGFKELYLWAINQDEQGTPKQIRKVIDQVRKHQIPVVFSESTI
SDKPAKQVAKESKARYGGVLYVDSLSTKDGKVPTYVDLLNVTVSTIVAGFEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 4e-87 65
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 4e-87 65
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 4e-87 65
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-87 65
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 3e-87 65

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
K756_01285 YP_008123081.1 chelated iron ABC transporter periplasmic-binding protein BAC0439 Protein 4e-92 73
K756_01285 YP_008123081.1 chelated iron ABC transporter periplasmic-binding protein BAC0349 Protein 2e-87 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
K756_01285 YP_008123081.1 chelated iron ABC transporter periplasmic-binding protein VFG0525 Protein 2e-87 65