Gene Information

Name : K756_01280 (K756_01280)
Accession : YP_008123080.1
Strain : Haemophilus parasuis ZJ0906
Genome accession: NC_021521
Putative virulence/resistance : Virulence
Product : chelated iron ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 242480 - 243241 bp
Length : 762 bp
Strand : -
Note : COG1121 ABC-type Mn/Zn transport systems, ATPase component

DNA sequence :
ATGAACATTCGCCTGAGTTCTCTTTCTGTTTCCGATGTCACCGTTCGTTATAGCAACGGACACACGGCAATTCACGATGT
TACTTTTCGCCTTGACGGTGGCACAATCTGTGCATTACTTGGGGTGAACGGCAGTGGCAAATCAACCTTATTTAAAAGCA
TTATGGGCTTAGTTCAGCCAAAGGGAAATATTGAGCTATGCGGACTGCCTGTCAATCAAGCCTTAAAACGCAATCTTGTT
GCTTATGTGCCACAAAGTGAAGAAGTGGACTGGCAATTTCCCGTATCCGTTTATGATGTGGTAATGATGGGGCGTTATGG
CTATATGAATTTTCTGCGTATCCCTTCTGCTGTGGATAAGCAAAAAGTTGCTGAAGCAATGGAGCGGGTCAATATTGCTC
ATCTTGCGGATCGTCAAATCGGTGAGCTTTCTGGGGGGCAGAAAAAACGCGTGTTTTTGGCACGTTCGCTTGCTCAAGAG
AGCAAAATTATCTTACTTGACGAACCTTTCACTGGCGTGGACGTAAATACCGAAAATGCGATAATCGATCTGCTCAAACA
GCTTCGGGATAGCGGTCACTTAATCCTAGTTTCTACCCATAATTTAGCCGCCGTACCAAGTTTTTGCGATCAAGCGGTAA
TGATTAATCGCACGGTGTTAGCAACAGGAACAATTGAAACAACATTCACCCCTGAAAATCTTGAGCGAGTGTTTGGCGGT
GTCTTGCGTTATCAGCAGTTACTCGGAGAACATAAGGAATAA

Protein sequence :
MNIRLSSLSVSDVTVRYSNGHTAIHDVTFRLDGGTICALLGVNGSGKSTLFKSIMGLVQPKGNIELCGLPVNQALKRNLV
AYVPQSEEVDWQFPVSVYDVVMMGRYGYMNFLRIPSAVDKQKVAEAMERVNIAHLADRQIGELSGGQKKRVFLARSLAQE
SKIILLDEPFTGVDVNTENAIIDLLKQLRDSGHLILVSTHNLAAVPSFCDQAVMINRTVLATGTIETTFTPENLERVFGG
VLRYQQLLGEHKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 4e-71 63
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 4e-71 63
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 3e-71 62
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 2e-71 62
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 8e-71 62

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
K756_01280 YP_008123080.1 chelated iron ABC transporter ATP-binding protein BAC0440 Protein 5e-82 69
K756_01280 YP_008123080.1 chelated iron ABC transporter ATP-binding protein BAC0350 Protein 2e-71 62
K756_01280 YP_008123080.1 chelated iron ABC transporter ATP-binding protein BAC0400 Protein 3e-46 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
K756_01280 YP_008123080.1 chelated iron ABC transporter ATP-binding protein VFG0526 Protein 1e-71 62