Gene Information

Name : xerD (K756_10285)
Accession : YP_008124714.1
Strain : Haemophilus parasuis ZJ0906
Genome accession: NC_021521
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1948939 - 1949832 bp
Length : 894 bp
Strand : -
Note : COG4974 Site-specific recombinase XerD

DNA sequence :
ATGAAACCACTTGATCCTATTATTGAACAATTTCTTGATACTCTATGGCAAGAGCAGGGATTATCAGAAAATACTGTAGC
CTCTTATAGACTAGATTTAGAAAGTTTTACCCAATGGCTTTCTGAACCCAATGCATTTTTAAAAGTAGACTATGTTGATC
TACAAACCTTTTTGGGCGAAAGACTGGAGCAAGGCTATAAAGCAACGAGTTCATCTCGTATGTTGAGCTGTTTGCGCAAG
TTTTTTCGTTTCCTTTATTTGGAAAAGTATCGAGATGATGATCCAACAGCAACACTTACATCTCCGCGTAAACCAGCCCA
TTTACCTAAATCATTGAGTGAAGAGCAGGTACTGGATTTACTGAATATTCCAAATACTCAGGATCCTTTAGAATTGCGTG
ATAAAGCAATGTTAGAACTACTTTATGCCACAGGTTTACGTGTCACAGAACTCGTTTCTCTAACACTGGATAACTTAAGC
CTGCGTCAAGGGTTAGTTCGTATCATTGGTAAAGGTGATAAAGAGCGTTTAGTGCCTTTAGGAGAAGAAGCGAGTTATTG
GATCCAACAGTTTTTTGAGTATGGGCGAAGTTCACTGCTTAATGGTATGCAGTCAGATGTGGTTTTTCCTAGCCGTTTAG
GCAATCAAATGACCCGTCAAACTTTTTGGCATCGAATTAAGCATTATGCGTTGTTGGCGGGTATTGATAGTAATAAACTC
TCTCCACACGTTTTACGCCACGCGTTTGCAACACATTTAGTTAATCACGGTGCAGATTTACGGGTTGTGCAGATGTTACT
TGGACATAGTGATCTGTCTACGACACAAATTTATACCCAAGTGGCGAAAACTCGTTTAAAATCACTGCATCAACAGTTTC
ACCCAAGAGGATAA

Protein sequence :
MKPLDPIIEQFLDTLWQEQGLSENTVASYRLDLESFTQWLSEPNAFLKVDYVDLQTFLGERLEQGYKATSSSRMLSCLRK
FFRFLYLEKYRDDDPTATLTSPRKPAHLPKSLSEEQVLDLLNIPNTQDPLELRDKAMLELLYATGLRVTELVSLTLDNLS
LRQGLVRIIGKGDKERLVPLGEEASYWIQQFFEYGRSSLLNGMQSDVVFPSRLGNQMTRQTFWHRIKHYALLAGIDSNKL
SPHVLRHAFATHLVNHGADLRVVQMLLGHSDLSTTQIYTQVAKTRLKSLHQQFHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 5e-56 55
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 5e-56 55