Gene Information

Name : Lp16_E031 (Lp16_E031)
Accession : YP_008122698.1
Strain :
Genome accession: NC_021517
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 26719 - 28437 bp
Length : 1719 bp
Strand : +
Note : -

DNA sequence :
ATGCAAGATTATTATAACATGAATCAAACCACTTTGAGTATTGCCTTGGATTACCAACCAGAAGAGCATCATTCTGCTCG
TTACATCAACCAGCTTGTTGAGAGTTTAAAACTAAAATATGATTACCAGTTTGGCCGTCCGCGGGAATATAACCTCGGTT
CCATGTTAAAACTGGTCCTTTTAGCGTACAGCTATGGCATTTTCAGCAGTCGTAAAATTGAACGGTTTGCCCGTGAAAAC
AAGCCAGCTGGGTGGTTAATTGCCGACCAAATTCCGTCCTACCGGACGATTTGTCGCTTTAGAATTTCTGATGAACTGGC
CACTTTGACAACTGATAGCTTATCACAACTAACTCAATATCTTCGTCAAAATGGCATGATTGATGATGTTTCATTTATTG
ATGGAACTAAGATCCTAGCCGACGCCAACAAGTATAGCTTTGTTTGGAAGAAGAATACGATACGATTTGACAAGATGAAT
CGCGAGAAACTCGTTGACCTGTTAGGCGAGCTTCATGAAGCTAAAATTGTCGGTGAAATTCCGGCAGGATCAGAGCTGAC
TCCCGAACTATTGGATATCATGATTAGCAAGGTTGAGGATCACTTAGTGGTCCTTAATGAAACCGTGGAAGCAACTAAGC
AGGTTTCCCCGAACCCAGCCAAACAGCAACGCCGGACTGTTAAATCACAAAAACGTAAGTTGGACAAACGACGTGATAAA
ATGCGTGAACACCAAGCACAGCAAGCAATCTATGGTCAGCGTAACAGTTACTCTAAGACGGACTATGATGCTACCTTCAT
GCGGGTCAAGGAAGATCCGATGCAAAACGGTCAATTAAAACCTGCCTACAACGTTCAAATCGCCACGAGTAATCAGTTCA
TTACGGGATATCGGCTTTTCCAAAATCCAACCGACACACGAACCTTACAACCGTTTATTGAACATTTAAAGGCCAACAAT
GTGTTAGGTCACACCATCGTTGCCGATGCCGGATACGGTTCCGAAAGTAATTATCGGTACTTGGAAGATGAATTCGGTCA
GCATACCGTTTTGATTCCCTACGGCACAATGCTTAAAGAGAATAGTCGAAAATGGCAAAGTGATGACCGTAAGGTTATGA
ACTGGGACTATCATGAAAAAGATGATTATTTTATCAATCCACAAAACGTCCGGTTTAATTTTAATGCTTATCGTCAACGG
ACTGATAAGTATGGTTTTACCCGTGACTTTAAAGAATACATTGCCGAAAAGTATGATGAAAATCATCGACTAATTGCCGC
GGCACTAACACCAAAAGGATATTTTAAAAGGATTTACGTGAACGAAAATTGGGAATATTTCAAATCGAAACAACGAGAAT
TACTTTCAGCTCCAGAAACTGGTCAGATTTACGCTCAACGTAAGATCGATGTTGAGCCAGTTTTTGGCAAGATGAAGGCT
TCTTTACATTTCAATCGATTCTCGGTGCGAGGTTTCGACAAGGTCACCAAGGAAGCCGGAATCGTAATACTGGCGTTAAA
CATTATGAAACTGGTCACGGTAGGGACCAGTTTTAAAAATCAAAGGCGTAAACAAATGGGACGAGAAACCAAAATTCGGT
TTCTCGTCCCATTTACTTATACAGAGGCTAGTTATGTCACAGCCTCTTTGTTTATTATGGTATTATGTCGTTTCGTCTTT
GTGGATTTTTCTTATTATTTCGAATGCTTCTTTTTTTGA

Protein sequence :
MQDYYNMNQTTLSIALDYQPEEHHSARYINQLVESLKLKYDYQFGRPREYNLGSMLKLVLLAYSYGIFSSRKIERFAREN
KPAGWLIADQIPSYRTICRFRISDELATLTTDSLSQLTQYLRQNGMIDDVSFIDGTKILADANKYSFVWKKNTIRFDKMN
REKLVDLLGELHEAKIVGEIPAGSELTPELLDIMISKVEDHLVVLNETVEATKQVSPNPAKQQRRTVKSQKRKLDKRRDK
MREHQAQQAIYGQRNSYSKTDYDATFMRVKEDPMQNGQLKPAYNVQIATSNQFITGYRLFQNPTDTRTLQPFIEHLKANN
VLGHTIVADAGYGSESNYRYLEDEFGQHTVLIPYGTMLKENSRKWQSDDRKVMNWDYHEKDDYFINPQNVRFNFNAYRQR
TDKYGFTRDFKEYIAEKYDENHRLIAAALTPKGYFKRIYVNENWEYFKSKQRELLSAPETGQIYAQRKIDVEPVFGKMKA
SLHFNRFSVRGFDKVTKEAGIVILALNIMKLVTVGTSFKNQRRKQMGRETKIRFLVPFTYTEASYVTASLFIMVLCRFVF
VDFSYYFECFFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAUSA300_0034 YP_492755.1 IS1272, transposase Not tested Type-IV SCCmec Protein 6e-74 45
SACOL0036 YP_184947.1 IS1272 transposase Not tested Type-I SCCmec Protein 2e-75 45
SAMSHR1132_00350 YP_005324559.1 putative transposase Not tested Type-IIIinv SCCmec Protein 2e-75 45
MW0034 NP_644849.1 hypothetical protein Not tested Type-IV SCCmec Protein 2e-75 45
unnamed BAA86649.1 hypothetical protein Not tested Type-I SCCmec Protein 2e-75 45
tnp YP_254534.1 IS1272 transposase Not tested ¥ðSh2 Protein 1e-58 41
SE0076 NP_763631.1 transposase Not tested SCCpbp4 Protein 2e-69 41