Gene Information

Name : Lp16_0883 (Lp16_0883)
Accession : YP_008120718.1
Strain : Lactobacillus plantarum 16
Genome accession: NC_021514
Putative virulence/resistance : Virulence
Product : manganese/zinc ABC transporter, substrate binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 949782 - 950723 bp
Length : 942 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAACGAAATTAATTGCACTGATTGGAGTCATCGCGATGGTTACCGGGATGGCAGTATTTCTGAATCAACGCCAGCA
AAGTGCCAAAGCGACGACCACTAGTGCCAAAATCCGGGTCGTAAGTACGAACTCGATTCTAGATGATATGGTGAAAAATG
TGGGTGGGCAGTACGTCCAAAATTACAGTATTGTGAAGCGCGGCACTGACCCGCATGAGTATGAACCACGGCCCACTGAT
ATTGCGGCAACTGCCGAAGCTGACGTGATTTTTTATAATGGCTTAAACCTTGAAACTGGCGGTAATGGCTGGTTTAAAAA
GTTAGTGACGGCTTCCAAAAAGGACTTTGACCACGATGTTTTTGCGGCCAGTAAGGGAATTAAGGTCAAATATTTAACGA
CGAACGTTAATGAGCCGGACCCCCATGCTTGGTTAGATCTCGCCAACGGGATTCAATATCTCAAGAACATCAACCGGACG
TTGCAGGCCAAGGATCCTAAGCACGCCGCTGTTTATCAAAAGAATACGGATCGCTACGTGGCAAAACTAACAAAACTGCA
TGAGAGCGCTCAAACCAAATTCAAGCAGATCCCGACGAGTCAACGATTATTAGTGACATCCGAAGGTGCCTTTAAGTATT
TCTCGGCGGCCTACCATGTGCCCGCTGCTTATATTTGGGAAGTGAATACGGAATCGCAAGGCACGCCAGCTCAGATGCGG
ACGGCGTTGAAGAAAATTGAAGGAACCCAGGTTCGAAGTTTGTTTGTCGAATCATCCGTATCACCGAAATCGATGAATAA
GCTTTCACAGGAGACGGGAATCCCCGTTGCTAGTACGATTTTTACCGATTCGCTGGCAGCTAAAGGCAAACCGGGTGATA
CGTACTACTCAATGTTGAAGTGGAATCTTGATAAGATTTATGCTGGGCTGACTCGGTTGTAG

Protein sequence : 
MKTKLIALIGVIAMVTGMAVFLNQRQQSAKATTTSAKIRVVSTNSILDDMVKNVGGQYVQNYSIVKRGTDPHEYEPRPTD
IAATAEADVIFYNGLNLETGGNGWFKKLVTASKKDFDHDVFAASKGIKVKYLTTNVNEPDPHAWLDLANGIQYLKNINRT
LQAKDPKHAAVYQKNTDRYVAKLTKLHESAQTKFKQIPTSQRLLVTSEGAFKYFSAAYHVPAAYIWEVNTESQGTPAQMR
TALKKIEGTQVRSLFVESSVSPKSMNKLSQETGIPVASTIFTDSLAAKGKPGDTYYSMLKWNLDKIYAGLTRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0577 NP_814342.1 adhesion lipoprotein Virulence Not named Protein 6e-74 50
ef0095 AAM75298.1 EF0095 Not tested Not named Protein 5e-74 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lp16_0883 YP_008120718.1 manganese/zinc ABC transporter, substrate binding protein VFG2165 Protein 3e-74 56
Lp16_0883 YP_008120718.1 manganese/zinc ABC transporter, substrate binding protein VFG1359 Protein 1e-74 54
Lp16_0883 YP_008120718.1 manganese/zinc ABC transporter, substrate binding protein VFG2157 Protein 6e-70 50